Protein Info for mRNA_1577 in Rhodosporidium toruloides IFO0880

Name: 9945
Annotation: K03844 ALG11 alpha-1,2-mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 565 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF15924: ALG11_N" amino acids 54 to 267 (214 residues), 277.6 bits, see alignment E=1.4e-86 PF00534: Glycos_transf_1" amino acids 351 to 503 (153 residues), 65.4 bits, see alignment E=7.3e-22

Best Hits

Predicted SEED Role

"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Alpha-1,2-mannosyltransferase ALG11) (Asparagine-linked glycosylation protein 11) (Protein LEAF WILTING 3)" (EC 2.4.1.131)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.131

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (565 amino acids)

>mRNA_1577 K03844 ALG11 alpha-1,2-mannosyltransferase (Rhodosporidium toruloides IFO0880)
MTALWSLGLSLAVPLLSITLLLASLRRYLIPRRSLAQRLRVLARLGYTSPHIRIVGFFHP
YCNAGGGGERVLWTALACMQREMKGEAVVFVVYTGDVGHGKASKAEILAKVKSRFDITLS
PSTLHFIPLENRWLVEDSTYPRLTLLGQSAGSVLLALEGLIGPEGCVPDVWIDTMGYAFA
YPLVKFLCRIPVASYTHYPTISTDMLHRVSSRLSTHTNSTLIASSRALSALKLAYYVVFA
RVYSWSLRKAGVVWVNSSWTRGHVEGLVGVQREEEELEGEVLLDGGEEPSTTKLRQRRKL
TKEETPTPSSAPSRTPNRPTSAPRIRLLYPPCDTLHLSSLPHSTSSRIGSSDPIIIFSLA
QFRPEKEHPTQLRALASLFSSSTLSPTLKERVKLVCAGSVRNEADAKRVEALRALASELG
VQEKIEFVVNAEYGQICEWMGRASVGLHTMVDEHFGITVVEFQAAGLIPLAHATAGPLLD
ILLPSPSGTPTGFLAPSTSSPSSSTSSLSEAFAAQLEYIVSLPTDEQDKIREAARSNAQE
RFSVRRFEEGWMSGWREVVGGKEGW