Protein Info for mRNA_1590 in Rhodosporidium toruloides IFO0880

Name: 9958
Annotation: KOG0586 Serine/threonine protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1130 transmembrane" amino acids 818 to 836 (19 residues), see Phobius details PF00069: Pkinase" amino acids 790 to 902 (113 residues), 48.5 bits, see alignment E=8.2e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1130 amino acids)

>mRNA_1590 KOG0586 Serine/threonine protein kinase (Rhodosporidium toruloides IFO0880)
MGDAARSRLMSPEPMDGVEHYGDEKTNRDVRMRGMSEEPQHSDPVTIPTAANRVDTSSSF
TASPGPSPSVSPTSGAASASVSVQRNPSLRARDAFSRLRIGSFGGTIGRPPPPTSSSTTT
SPAPASPTLSAGSSAEAASLDASTSSLPRRQNSTGTSKAASFLSAFRSPPSSVGGRSPSP
PLRDGQMPSFSSALPLRGDERGYKLVTKGEDGEEYEYELGKELGRGGMGLVREAVRRRRR
TCDKGKGKEREDGGDSAVQSDCDPDLDDEIEDDAIKVAVKIIPRQHHASLPFLQGTGAGA
PAGNGIPGSTLPSGLVHHLHPSPSPSPGTPQGRRNASSDSPMRTDSYLSTNSSSNTSLSF
RHPSRDRAAAVERARSASSPIRPGMITRGLTLTAVEASPLPSPSLQDGTDGPDAAMMGTS
APEHEDGFFAARARSDVQPGYDDDHPPEMDLQNPSDLLDLLLQRELSIWRQLSGLPSSST
AYAAEHPTRWTGKGGHPHIVALIGSHRTNEFDYVFMPLAEGGTLLEYLNNPDARREASPA
GRASSRSGSRAASRGRAQKPRPRGSIPIAGSLSPPGGLAAQSGPKGLPLDEAGETFAQIV
EAVRWMHEEAGVAHRDLKLENVVGCWSTDSGPAADFEAPMPASQAQEGGRGRSRSRRRGS
QMDEEGPPQMMRIKRKRKRVWKLADFGLAEVIPPQNDSPSSPTSPVHDVQPLAALARAGS
LNRPPGERGGGGNGLGSSIGPGASAGSGQSSSAFLPHPHRNPPVAFPQHHASPTAASTSH
PAHNSPLSALLHPVGSLPYSSPEALRSPVPIVHPSTDIWALGCVLYALVAGRLPIWEEWE
LRLRVKLVKGEWDVPDELDPNQAISDADRHERELALEVLKGCLEKDVEKRWTIRQVWESR
WLAHIRERDAHEREQRRRNKMAHLRLQVPQSPSALSTTSSLAPSPSPTSPTATRASSRGR
PATRSSSAHPGSHYGPYPPPAPSTGASHTPAASSTPTGGRQSRSRTRLATHTRSTSRSSA
YAHQYGAAGSEGGEQERRERGRSERRLRWDEERGVPYPGAGRRSLSQASSSTSASYGDQT
GEASGSSTPGGPGTPAEGGHAQAQSGHATRGGRRHEWDDQERLETVGEPY