Experiment setAOA_Oleic for Rhodosporidium toruloides IFO0880

Compare to:

YNB Oleic Acid

200 most detrimental genes:

  gene name fitness t score description  
mRNA_6411 14779 +2.8 3.6 BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M... compare
mRNA_2796 11164 +2.7 2.1 K08286 E2.7.11.- protein-serine/threonine kinase compare
mRNA_3307 11675 +2.4 18.8 K06268 PPP3R, CNB serine/threonine-protein phosphatase 2B regulatory subunit compare
mRNA_4878 13246 +2.4 20.7 K04348 PPP3C, CNA serine/threonine-protein phosphatase 2B catalytic subunit compare
mRNA_1755 10123 +2.2 16.7 K00326 E1.6.2.2 cytochrome-b5 reductase compare
mRNA_6267 14635 +2.1 10.5 KOG1721 FOG Zn-finger compare
mRNA_8230 16598 +2.1 9.3 K09668 LARGE glycosyltransferase-like protein LARGE compare
mRNA_5720 14088 +2.0 12.5 K04392 RAC1 Ras-related C3 botulinum toxin substrate 1 compare
mRNA_699 9067 +2.0 8.7 K20289 COG2 conserved oligomeric Golgi complex subunit 2 compare
mRNA_3641 12009 +1.9 2.2 K17615 PPG1 serine/threonine-protein phosphatase PPG1 compare
mRNA_406 8774 +1.9 2.1 HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735 compare
mRNA_1134 9502 +1.8 3.6 K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B compare
mRNA_2270 10638 +1.8 11.1 K19833 CLA4 serine/threonine-protein kinase CLA4 compare
mRNA_4721 13089 +1.8 1.7 K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4 compare
mRNA_7515 15883 +1.8 18.1 K07827 KRAS, KRAS2 GTPase KRas compare
mRNA_5144 13512 +1.8 4.8 BLAST putative mit domain-containing protein [Erysiphe neca... compare
mRNA_3729 12097 +1.7 7.5 K15280 SLC35C2 solute carrier family 35, member C2 compare
mRNA_1534 9902 +1.7 6.5 K12493 ARFGAP2_3 ADP-ribosylation factor GTPase-activating protein 2/3 compare
mRNA_7823 16191 +1.7 2.0 K03011 RPB3, POLR2C DNA-directed RNA polymerase II subunit RPB3 compare
mRNA_3021 11389 +1.6 4.2 K00697 otsA trehalose 6-phosphate synthase compare
mRNA_3302 11670 +1.6 4.6 K07232 chaC cation transport protein ChaC compare
mRNA_7666 16034 +1.5 1.3 K20184 VPS41 vacuolar protein sorting-associated protein 41 compare
mRNA_523 8891 +1.5 4.7 K11644 SIN3A paired amphipathic helix protein Sin3a compare
mRNA_7071 15439 +1.5 3.4 BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF... compare
mRNA_6801 15169 +1.5 8.8 K15279 SLC35C1, FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1 compare
mRNA_6288 14656 +1.4 3.8 KOG0876 Manganese superoxide dismutase compare
mRNA_1699 10067 +1.4 4.6 K10751 CHAF1B chromatin assembly factor 1 subunit B compare
mRNA_109 8477 +1.4 2.1 Hypothetical Protein compare
mRNA_1031 9399 +1.4 5.1 Hypothetical Protein compare
mRNA_6819 15187 +1.4 7.2 SUPERFAMILY--SSF103107 compare
mRNA_3639 12007 +1.4 1.6 K11204 GCLC glutamate--cysteine ligase catalytic subunit compare
mRNA_1260 9628 +1.4 14.4 Hypothetical Protein compare
mRNA_7125 15493 +1.4 5.8 K11315 TADA3, ADA3, NGG1 transcriptional adapter 3 compare
mRNA_2430 10798 +1.4 10.6 K09467 MIG zinc-finger protein CreA/MIG compare
mRNA_3254 11622 +1.3 1.5 K12161 URM1 ubiquitin related modifier 1 compare
mRNA_5496 13864 +1.3 2.0 HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785 compare
mRNA_3285 11653 +1.3 5.0 KOG2069 Golgi transport complex subunit compare
mRNA_3807 12175 +1.3 10.6 HMMPfam-Docking domain of Afi1 for Arf3 in vesicle trafficking-PF07792,HMMPfam-Stabilization of polarity axis-PF08616 compare
mRNA_3532 11900 +1.3 12.8 K00670 NAA30, MAK3 N-alpha-acetyltransferase 30 compare
mRNA_6883 15251 +1.3 8.6 BLAST similar to An03g02750 [Aspergillus kawachii IFO 4308] compare
mRNA_7083 15451 +1.3 2.3 K18803 HPM1 protein-histidine N-methyltransferase compare
mRNA_2707 11075 +1.3 10.0 KOG0254 Predicted transporter (major facilitator superfamily) compare
mRNA_1000 9368 +1.3 5.8 BLAST glycosyltransferase 2 [Moniliophthora roreri MCA ... compare
mRNA_6513 14881 +1.3 9.5 HMMPfam-Glycosyl transferase family 90-PF05686,SMART-Putative lipopolysaccharide-modifying enzyme.-SM00672 compare
mRNA_274 8642 +1.3 2.2 BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena] compare
mRNA_5476 13844 +1.3 3.9 KOG4719 Nuclear pore complex protein compare
mRNA_227 8595 +1.3 7.4 K03259 EIF4E translation initiation factor 4E compare
mRNA_33 8401 +1.3 8.0 HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371 compare
mRNA_2822 11190 +1.3 0.8 SUPERFAMILY--SSF52047 compare
mRNA_2741 11109 +1.3 3.0 HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249 compare
mRNA_4592 12960 +1.3 2.3 K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A compare
mRNA_762 9130 +1.3 1.6 K11090 LA, SSB lupus La protein compare
mRNA_7510 15878 +1.3 8.2 K11644 SIN3A paired amphipathic helix protein Sin3a compare
mRNA_8490 16858 +1.3 15.4 ProSitePatterns-Zinc finger PHD-type signature.-PS01359,ProSiteProfiles-Zinc finger PHD-type profile.-PS50016,SMART-PHD zinc finger-SM00249,SUPERFAMILY--SSF57903 compare
mRNA_6942 15310 +1.3 4.1 K15029 EIF3L translation initiation factor 3 subunit L compare
mRNA_1543 9911 +1.2 5.2 Hypothetical Protein compare
mRNA_4005 12373 +1.2 1.9 HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 compare
mRNA_3597 11965 +1.2 2.1 K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1 compare
mRNA_6791 15159 +1.2 2.8 K00888 PI4KA phosphatidylinositol 4-kinase A compare
mRNA_6562 14930 +1.2 3.5 K20353 SEC16 COPII coat assembly protein SEC16 compare
mRNA_811 9179 +1.2 2.9 Interpro Glycosyl-transferase for dystroglycan compare
mRNA_7236 15604 +1.2 1.9 Hypothetical Protein compare
mRNA_743 9111 +1.2 2.8 K08493 VTI1 vesicle transport through interaction with t-SNAREs 1 compare
mRNA_5548 13916 +1.2 4.5 KOG4006 Anti-proliferation factor BTG1/TOB compare
mRNA_4961 13329 +1.2 1.2 Hypothetical Protein compare
mRNA_7572 15940 +1.2 0.8 Hypothetical Protein compare
mRNA_5145 13513 +1.2 7.2 Hypothetical Protein compare
mRNA_70 8438 +1.2 5.8 HMMPfam-Membrane-associating domain-PF01284 compare
mRNA_4137 12505 +1.2 8.5 BLAST putative protein [Melanopsichium pennsylvanicum 4] compare
mRNA_604 8972 +1.2 4.5 K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic) compare
mRNA_624 8992 +1.2 3.6 K13886 CORO1B_1C_6 coronin-1B/1C/6 compare
mRNA_1261 9629 +1.2 1.5 K04712 DEGS sphingolipid Delta-4 desaturase compare
mRNA_2189 10557 +1.2 4.0 K11236 CDC24 cell division control protein 24 compare
mRNA_8282 16650 +1.2 1.7 K11359 SPT7 transcriptional activator SPT7 compare
mRNA_1560 9928 +1.2 2.5 HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370 compare
mRNA_8395 16763 +1.1 2.9 SUPERFAMILY--SSF52047 compare
mRNA_5151 13519 +1.1 5.4 HMMPfam-SUR7/PalI family-PF06687 compare
mRNA_4280 12648 +1.1 8.2 HMMPfam-Actin interacting protein 3-PF03915,SMART-Actin interacting protein 3-SM00806 compare
mRNA_4730 13098 +1.1 2.5 K06062 PCAF, KAT2, GCN5 histone acetyltransferase compare
mRNA_1350 9718 +1.1 3.0 KOG3376 Uncharacterized conserved protein compare
mRNA_2056 10424 +1.1 2.9 K11667 INO80C, IES6 INO80 complex subunit C compare
mRNA_209 8577 +1.1 6.4 K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2 compare
mRNA_6212 14580 +1.1 1.7 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 compare
mRNA_8159 16527 +1.1 4.6 K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41 compare
mRNA_3383 11751 +1.1 1.8 HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383 compare
mRNA_2437 10805 +1.1 5.7 Hypothetical Protein compare
mRNA_1725 10093 +1.1 9.1 KOG2343 Glucose-repressible protein and related proteins compare
mRNA_2891 11259 +1.1 2.4 Hypothetical Protein compare
mRNA_1741 10109 +1.1 4.4 HMMPfam-Calcipressin-PF04847 compare
mRNA_4955 13323 +1.1 1.7 K20306 TRAPPC9, TRS120 trafficking protein particle complex subunit 9 compare
mRNA_1415 9783 +1.1 6.7 Hypothetical Protein compare
mRNA_7266 15634 +1.1 2.3 Hypothetical Protein compare
mRNA_1314 9682 +1.1 4.2 BLAST carboxymethylenebutenolidase [Rhizoctonia solani AG-1... compare
mRNA_3245 11613 +1.1 4.4 HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550,HMMPfam-Protein of unknown function (DUF3295)-PF11702 compare
mRNA_5141 13509 +1.1 4.0 K12198 CHMP5, VPS60 charged multivesicular body protein 5 compare
mRNA_4101 12469 +1.1 2.2 Hypothetical Protein compare
mRNA_4673 13041 +1.1 1.8 K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase compare
mRNA_7434 15802 +1.1 2.2 HMMPfam-Outer membrane protein TOM13-PF08219 compare
mRNA_8276 16644 +1.1 11.7 K06630 YWHAE 14-3-3 protein epsilon compare
mRNA_7571 15939 +1.1 1.5 K11450 KDM1A, AOF2, LSD1 lysine-specific histone demethylase 1A compare
mRNA_6536 14904 +1.1 5.4 HMMPfam-Protein of unknown function (DUF837)-PF05769 compare
mRNA_4564 12932 +1.1 6.8 K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45 compare
mRNA_2915 11283 +1.1 2.6 Hypothetical Protein compare
mRNA_2438 10806 +1.0 1.4 HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224 compare
mRNA_5807 14175 +1.0 3.0 HMMPfam-Protein of unknown function (DUF2638)-PF10937 compare
mRNA_3931 12299 +1.0 5.6 BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682] compare
mRNA_1896 10264 +1.0 6.9 K00844 HK hexokinase compare
mRNA_6839 15207 +1.0 7.5 K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1 compare
mRNA_5071 13439 +1.0 7.5 KOG3038 Histone acetyltransferase SAGA associated factor SGF29 compare
mRNA_1677 10045 +1.0 9.7 K15620 GOLPH3, GPP34 golgi phosphoprotein 3 compare
mRNA_8400 16768 +1.0 2.0 K12189 VPS25, EAP20 ESCRT-II complex subunit VPS25 compare
mRNA_6489 14857 +1.0 7.7 KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases compare
mRNA_5419 13787 +1.0 7.3 Interpro Cut8, nuclear proteasome tether protein compare
mRNA_2396 10764 +1.0 7.7 K14169 CTU2, NCS2 cytoplasmic tRNA 2-thiolation protein 2 compare
mRNA_7191 15559 +1.0 2.3 Hypothetical Protein compare
mRNA_5603 13971 +1.0 6.3 K09523 DNAJC3 DnaJ homolog subfamily C member 3 compare
mRNA_3012 11380 +1.0 4.1 K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit compare
mRNA_4514 12882 +1.0 2.9 K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma compare
mRNA_7103 15471 +1.0 1.8 Hypothetical Protein compare
mRNA_4866 13234 +1.0 1.6 KOG2881 Predicted membrane protein compare
mRNA_5133 13501 +1.0 5.4 Interpro Proteasome assembly chaperone 4 compare
mRNA_7818 16186 +1.0 1.9 K10865 MRE11 double-strand break repair protein MRE11 compare
mRNA_8394 16762 +1.0 5.8 KOG3680 Uncharacterized conserved protein compare
mRNA_2973 11341 +1.0 7.1 K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase compare
mRNA_6793 15161 +1.0 8.3 KOG2375 Protein interacting with poly(A)-binding protein compare
mRNA_2386 10754 +1.0 5.3 K01530 E3.6.3.1 phospholipid-translocating ATPase compare
mRNA_4060 12428 +1.0 5.2 K01537 E3.6.3.8 Ca2+-transporting ATPase compare
mRNA_7200 15568 +1.0 3.2 K14816 REI1 pre-60S factor REI1 compare
mRNA_3753 12121 +1.0 6.6 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase compare
mRNA_7126 15494 +1.0 3.5 K15122 SLC41A solute carrier family 41 compare
mRNA_5147 13515 +1.0 5.0 Hypothetical Protein compare
mRNA_6319 14687 +1.0 9.1 KOG1729 FYVE finger containing protein compare
mRNA_425 8793 +1.0 2.7 HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735 compare
mRNA_4886 13254 +1.0 3.7 Hypothetical Protein compare
mRNA_5540 13908 +1.0 6.5 Interpro GDP-fucose protein O-fucosyltransferase compare
mRNA_6917 15285 +1.0 3.0 K04883 KCNAB2 potassium voltage-gated channel Shaker-related subfamily A, beta member 2 compare
mRNA_4964 13332 +1.0 4.5 K08334 BECN1, VPS30, ATG6 beclin 1 compare
mRNA_273 8641 +1.0 2.7 K15174 PAF1 RNA polymerase II-associated factor 1 compare
mRNA_400 8768 +1.0 6.0 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase compare
mRNA_3816 12184 +1.0 9.5 KOG3613 Dopey and related predicted leucine zipper transcription factors compare
mRNA_3770 12138 +1.0 2.5 K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9 compare
mRNA_5125 13493 +0.9 2.4 Interpro Protein of unknown function (DUF3431) compare
mRNA_7461 15829 +0.9 3.9 K08964 mtnB methylthioribulose-1-phosphate dehydratase compare
mRNA_8205 16573 +0.9 2.2 K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1 compare
mRNA_7208 15576 +0.9 4.4 K03361 CDC4 F-box and WD-40 domain protein CDC4 compare
mRNA_4244 12612 +0.9 4.3 Hypothetical Protein compare
mRNA_5102 13470 +0.9 7.6 KOG0619 FOG Leucine rich repeat compare
mRNA_387 8755 +0.9 2.4 Hypothetical Protein compare
mRNA_4321 12689 +0.9 7.9 K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1 compare
mRNA_1686 10054 +0.9 1.7 BLAST putative protein [Melanopsichium pennsylvanicum 4] compare
mRNA_4466 12834 +0.9 1.6 Hypothetical Protein compare
mRNA_559 8927 +0.9 0.9 KOG4672 Uncharacterized conserved low complexity protein compare
mRNA_4079 12447 +0.9 9.4 KOG2518 5'-3' exonuclease compare
mRNA_895 9263 +0.9 1.5 Hypothetical Protein compare
mRNA_942 9310 +0.9 1.7 KOG1743 Ferric reductase-like proteins compare
mRNA_4349 12717 +0.9 1.1 K02873 RP-L13e, RPL13 large subunit ribosomal protein L13e compare
mRNA_602 8970 +0.9 3.7 K14642 YND1 golgi apyrase compare
mRNA_3975 12343 +0.9 2.5 KOG1938 Protein with predicted involvement in meiosis (GSG1) compare
mRNA_1726 10094 +0.9 5.9 BLAST Protein priA [Grifola frondosa] compare
mRNA_1435 9803 +0.9 1.3 Hypothetical Protein compare
mRNA_8030 16398 +0.9 4.5 KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains compare
mRNA_3203 11571 +0.9 1.8 Hypothetical Protein compare
mRNA_5550 13918 +0.9 1.4 K09424 REB1 Myb-like DNA-binding protein REB1 compare
mRNA_2616 10984 +0.9 2.8 KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins compare
mRNA_4449 12817 +0.9 4.8 K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1 compare
mRNA_2364 10732 +0.9 2.5 K20471 COPD, ARCN1, RET2 coatomer subunit delta compare
mRNA_5465 13833 +0.9 2.6 Hypothetical Protein compare
mRNA_6347 14715 +0.9 3.7 Hypothetical Protein compare
mRNA_6538 14906 +0.9 5.3 BLAST AGC/AKT protein kinase [Microbotryum lychnidis-dioica... compare
mRNA_8148 16516 +0.9 2.2 HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961 compare
mRNA_7077 15445 +0.9 6.0 K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase compare
mRNA_1969 10337 +0.9 1.8 K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1 compare
mRNA_3352 11720 +0.9 11.2 K06699 PSME4 proteasome activator subunit 4 compare
mRNA_3664 12032 +0.9 0.7 K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 compare
mRNA_5555 13923 +0.9 1.9 K19984 EXOC5, SEC10 exocyst complex component 5 compare
mRNA_2131 10499 +0.9 2.4 K09580 PDIA1, P4HB protein disulfide-isomerase A1 compare
mRNA_7475 15843 +0.9 1.3 K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein compare
mRNA_4302 12670 +0.8 6.7 K07819 B3GALT1 beta-1,3-galactosyltransferase 1 compare
mRNA_7671 16039 +0.8 1.7 SUPERFAMILY--SSF56112 compare
mRNA_2101 10469 +0.8 4.3 K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 compare
mRNA_1456 9824 +0.8 1.5 Hypothetical Protein compare
mRNA_1285 9653 +0.8 1.4 Interpro Ribosomal protein 60S L18 and 50S L18e 0 compare
mRNA_6049 14417 +0.8 3.7 K08517 SEC22 vesicle transport protein SEC22 compare
mRNA_7146 15514 +0.8 2.3 Hypothetical Protein compare
mRNA_3631 11999 +0.8 0.5 Hypothetical Protein compare
mRNA_2319 10687 +0.8 3.9 KOG3872 FOG FHA domain compare
mRNA_3777 12145 +0.8 2.9 K20346 TMED4_9_11 p24 family protein alpha compare
mRNA_7858 16226 +0.8 0.9 K11673 ACTR8, ARP8, INO80N actin-related protein 8 compare
mRNA_8149 16517 +0.8 2.9 KOG1198 Zinc-binding oxidoreductase compare
mRNA_6590 14958 +0.8 0.3 K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4 compare
mRNA_4968 13336 +0.8 3.7 KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion) compare
mRNA_2352 10720 +0.8 1.5 K02903 RP-L28e, RPL28 large subunit ribosomal protein L28e compare
mRNA_1627 9995 +0.8 1.2 K18551 SDT1 pyrimidine and pyridine-specific 5'-nucleotidase compare
mRNA_7085 15453 +0.8 2.3 HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689 compare
mRNA_2784 11152 +0.8 6.6 K20241 WDR44, RAB11BP WD repeat-containing protein 44 compare
mRNA_3687 12055 +0.8 1.8 K14837 NOP12 nucleolar protein 12 compare
mRNA_5155 13523 +0.8 3.5 BLAST unknown [Tremella fuciformis] compare
mRNA_3942 12310 +0.8 2.0 K20298 VPS52 vacuolar protein sorting-associated protein 52 compare
mRNA_6529 14897 +0.8 4.0 K03626 EGD2, NACA nascent polypeptide-associated complex subunit alpha compare
mRNA_509 8877 +0.8 1.3 K11566 ASK1 DASH complex subunit ASK1 compare


Specific Phenotypes

None in this experiment

For Rhodosporidium toruloides IFO0880 in growth on oleic acid experiments

For growth on oleic acid YNB Oleic across organisms