Gene info for mRNA_1654 in Rhodosporidium toruloides IFO0880

Name: 10022
Annotation: BLAST expressed protein [Cryptococcus neoformans var. neofo...
Type 1: Protein-coding gene
Located on scaffold scaffold_11, - strand, nucleotides 816,263 to 817,600
See nucleotide sequence around mRNA_1654 or for all of scaffold scaffold_11

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10017 and 10018 are separated by 886 nucleotides10018 and 10019 are separated by 193 nucleotides10019 and 10020 are separated by 567 nucleotides10020 and 10021 are separated by 915 nucleotides10021 and 10022 are separated by 636 nucleotides10022 and 10023 are separated by 1820 nucleotides10023 and 10024 are separated by 121 nucleotides10024 and 10025 are separated by 489 nucleotides10025 and 10026 are separated by 1146 nucleotides10026 and 10027 are separated by 810 nucleotides mRNA_1649: 10017 - KOG2495 NADH-dehydrogenase (ubiquinone), at 804,506 to 806,689 10017 mRNA_1650: 10018 - KOG0254 Predicted transporter (major facilitator superfamily), at 807,576 to 811,155 10018 mRNA_1651: 10019 - SUPERFAMILY--SSF69047, at 811,349 to 811,874 10019 mRNA_1652: 10020 - Hypothetical Protein, at 812,442 to 813,114 10020 mRNA_1653: 10021 - Hypothetical Protein, at 814,030 to 815,626 10021 mRNA_1654: 10022 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 816,263 to 817,600 10022 mRNA_1655: 10023 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 819,421 to 820,962 10023 mRNA_1656: 10024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 821,084 to 822,700 10024 mRNA_1657: 10025 - K08286 E2.7.11.- protein-serine/threonine kinase, at 823,190 to 825,684 10025 mRNA_1658: 10026 - K02893 RP-L23Ae, RPL23A large subunit ribosomal protein L23Ae, at 826,831 to 828,048 10026 mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828,859 to 833,266 10027
Locus Name Description Strand Phenotype
mRNA_1649 10017 KOG2495 NADH-dehydrogenase (ubiquinone) - cofit
mRNA_1650 10018 KOG0254 Predicted transporter (major facilitator superfamily) + cofit
mRNA_1651 10019 SUPERFAMILY--SSF69047 - insig.
mRNA_1652 10020 Hypothetical Protein + cofit
mRNA_1653 10021 Hypothetical Protein + cofit
mRNA_1654 10022 BLAST expressed protein [Cryptococcus neoformans var. neofo... - cofit
mRNA_1655 10023 HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679 - insig.
mRNA_1656 10024 HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402 - no data
mRNA_1657 10025 K08286 E2.7.11.- protein-serine/threonine kinase - strong
mRNA_1658 10026 K02893 RP-L23Ae, RPL23A large subunit ribosomal protein L23Ae - no data
mRNA_1659 10027 K08741 MSH5 DNA mismatch repair protein MSH5 - insig.

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