Gene info for mRNA_1717 in Rhodosporidium toruloides IFO0880

Name: 10085
Annotation: HMMPfam-Per1-like-PF04080
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 24,723 to 26,291
See nucleotide sequence around mRNA_1717 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10080 and 10081 are separated by 331 nucleotides10081 and 10082 are separated by 326 nucleotides10082 and 10083 are separated by 545 nucleotides10083 and 10084 are separated by 306 nucleotides10084 and 10085 are separated by 378 nucleotides10085 and 10086 are separated by 306 nucleotides10086 and 10087 are separated by 785 nucleotides10087 and 10088 are separated by 639 nucleotides10088 and 10089 are separated by 367 nucleotides10089 and 10090 are separated by 540 nucleotides mRNA_1712: 10080 - KOG2131 Uncharacterized conserved protein, contains JmjC domain, at 12,015 to 13,653 10080 mRNA_1713: 10081 - KOG0022 Alcohol dehydrogenase, class III, at 13,985 to 15,656 10081 mRNA_1714: 10082 - K01372 BLMH, pepC bleomycin hydrolase, at 15,983 to 18,222 10082 mRNA_1715: 10083 - K18328 DBR1 lariat debranching enzyme, at 18,768 to 21,096 10083 mRNA_1716: 10084 - K14799 TSR1 pre-rRNA-processing protein TSR1, at 21,403 to 24,344 10084 mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24,723 to 26,291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26,598 to 27,052 10086 mRNA_1719: 10087 - Hypothetical Protein, at 27,838 to 28,571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29,211 to 32,060 10088 mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32,428 to 34,334 10089 mRNA_1722: 10090 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 34,875 to 37,390 10090
Locus Name Description Strand Phenotype
mRNA_1712 10080 KOG2131 Uncharacterized conserved protein, contains JmjC domain - cofit
mRNA_1713 10081 KOG0022 Alcohol dehydrogenase, class III - cofit
mRNA_1714 10082 K01372 BLMH, pepC bleomycin hydrolase - cofit
mRNA_1715 10083 K18328 DBR1 lariat debranching enzyme - no data
mRNA_1716 10084 K14799 TSR1 pre-rRNA-processing protein TSR1 - no data
mRNA_1717 10085 HMMPfam-Per1-like-PF04080 - strong
mRNA_1718 10086 HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072 + no data
mRNA_1719 10087 Hypothetical Protein + cofit
mRNA_1720 10088 HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667 - insig.
mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 - cofit
mRNA_1722 10090 KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily - cofit

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