Gene info for mRNA_1722 in Rhodosporidium toruloides IFO0880

Name: 10090
Annotation: KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 34,875 to 37,390
See nucleotide sequence around mRNA_1722 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10085 and 10086 are separated by 306 nucleotides10086 and 10087 are separated by 785 nucleotides10087 and 10088 are separated by 639 nucleotides10088 and 10089 are separated by 367 nucleotides10089 and 10090 are separated by 540 nucleotides10090 and 10091 are separated by 1264 nucleotides10091 and 10092 are separated by 619 nucleotides10092 and 10093 are separated by 1908 nucleotides10093 and 10094 are separated by 509 nucleotides10094 and 10095 are separated by 1133 nucleotides mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24,723 to 26,291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26,598 to 27,052 10086 mRNA_1719: 10087 - Hypothetical Protein, at 27,838 to 28,571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29,211 to 32,060 10088 mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32,428 to 34,334 10089 mRNA_1722: 10090 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 34,875 to 37,390 10090 mRNA_1723: 10091 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 38,655 to 42,471 10091 mRNA_1724: 10092 - K08827 PRPF4B serine/threonine-protein kinase PRP4, at 43,091 to 44,788 10092 mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46,697 to 49,542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50,052 to 51,969 10094 mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53,103 to 55,256 10095
Locus Name Description Strand Phenotype
mRNA_1717 10085 HMMPfam-Per1-like-PF04080 - strong
mRNA_1718 10086 HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072 + no data
mRNA_1719 10087 Hypothetical Protein + cofit
mRNA_1720 10088 HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667 - insig.
mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 - cofit
mRNA_1722 10090 KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily - cofit
mRNA_1723 10091 KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain - cofit
mRNA_1724 10092 K08827 PRPF4B serine/threonine-protein kinase PRP4 - no data
mRNA_1725 10093 KOG2343 Glucose-repressible protein and related proteins + cofit
mRNA_1726 10094 BLAST Protein priA [Grifola frondosa] - cofit
mRNA_1727 10095 K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase - no data

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