Gene info for mRNA_1729 in Rhodosporidium toruloides IFO0880

Name: 10097
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 58,480 to 59,986
See nucleotide sequence around mRNA_1729 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10092 and 10093 are separated by 1908 nucleotides10093 and 10094 are separated by 509 nucleotides10094 and 10095 are separated by 1133 nucleotides10095 and 10096 are separated by 439 nucleotides10096 and 10097 are separated by 472 nucleotides10097 and 10098 are separated by 331 nucleotides10098 and 10099 are separated by 852 nucleotides10099 and 10100 are separated by 288 nucleotides10100 and 10101 are separated by 382 nucleotides10101 and 10102 are separated by 988 nucleotides mRNA_1724: 10092 - K08827 PRPF4B serine/threonine-protein kinase PRP4, at 43,091 to 44,788 10092 mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46,697 to 49,542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50,052 to 51,969 10094 mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53,103 to 55,256 10095 mRNA_1728: 10096 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 55,696 to 58,007 10096 mRNA_1729: 10097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 58,480 to 59,986 10097 mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60,318 to 61,237 10098 mRNA_1731: 10099 - Hypothetical Protein, at 62,090 to 63,277 10099 mRNA_1732: 10100 - Hypothetical Protein, at 63,566 to 64,770 10100 mRNA_1733: 10101 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 65,153 to 66,958 10101 mRNA_1734: 10102 - KOG1721 FOG Zn-finger, at 67,947 to 72,087 10102
Locus Name Description Strand Phenotype
mRNA_1724 10092 K08827 PRPF4B serine/threonine-protein kinase PRP4 - no data
mRNA_1725 10093 KOG2343 Glucose-repressible protein and related proteins + cofit
mRNA_1726 10094 BLAST Protein priA [Grifola frondosa] - cofit
mRNA_1727 10095 K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase - no data
mRNA_1728 10096 HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906 - cofit
mRNA_1729 10097 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit
mRNA_1730 10098 KOG4708 Mitochondrial ribosomal protein MRP17 + no data
mRNA_1731 10099 Hypothetical Protein - cofit
mRNA_1732 10100 Hypothetical Protein - cofit
mRNA_1733 10101 KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1 - cofit
mRNA_1734 10102 KOG1721 FOG Zn-finger - cofit

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