Gene info for mRNA_1801 in Rhodosporidium toruloides IFO0880

Name: 10169
Annotation: HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938
Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 231,185 to 232,547
See nucleotide sequence around mRNA_1801 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10164 and 10165 are separated by 110 nucleotides10165 and 10166 are separated by 513 nucleotides10166 and 10167 are separated by 149 nucleotides10167 and 10168 are separated by 149 nucleotides10168 and 10169 are separated by 137 nucleotides10169 and 10170 are separated by 74 nucleotides10170 and 10171 are separated by 292 nucleotides10171 and 10172 are separated by 177 nucleotides10172 and 10173 are separated by 910 nucleotides10173 and 10174 are separated by 589 nucleotides mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219,619 to 222,270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222,381 to 224,884 10165 mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225,398 to 226,777 10166 mRNA_1799: 10167 - KOG2489 Transmembrane protein, at 226,927 to 229,515 10167 mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229,665 to 231,047 10168 mRNA_1801: 10169 - HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938, at 231,185 to 232,547 10169 mRNA_1802: 10170 - K05546 GANAB alpha 1,3-glucosidase, at 232,622 to 238,014 10170 mRNA_1803: 10171 - K15205 TFC6 transcription factor C subunit 6, at 238,307 to 241,610 10171 mRNA_1804: 10172 - Hypothetical Protein, at 241,788 to 243,277 10172 mRNA_1805: 10173 - K00616 E2.2.1.2, talA, talB transaldolase, at 244,188 to 245,888 10173 mRNA_1806: 10174 - BLAST related to C2H2 zinc finger protein [Ustilago hordei], at 246,478 to 247,533 10174
Locus Name Description Strand Phenotype
mRNA_1796 10164 K10878 SPO11 meiotic recombination protein SPO11 + cofit
mRNA_1797 10165 KOG2641 Predicted seven transmembrane receptor - rhodopsin family - cofit
mRNA_1798 10166 KOG0725 Reductases with broad range of substrate specificities + cofit
mRNA_1799 10167 KOG2489 Transmembrane protein - cofit
mRNA_1800 10168 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + cofit
mRNA_1801 10169 HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938 + no data
mRNA_1802 10170 K05546 GANAB alpha 1,3-glucosidase - cofit
mRNA_1803 10171 K15205 TFC6 transcription factor C subunit 6 - no data
mRNA_1804 10172 Hypothetical Protein + cofit
mRNA_1805 10173 K00616 E2.2.1.2, talA, talB transaldolase - no data
mRNA_1806 10174 BLAST related to C2H2 zinc finger protein [Ustilago hordei] - cofit

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