Gene info for mRNA_1880 in Rhodosporidium toruloides IFO0880

Name: 10248
Annotation: KOG0254 Predicted transporter (major facilitator superfamily)
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 424,298 to 426,105
See nucleotide sequence around mRNA_1880 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10243 and 10244 are separated by 130 nucleotides10244 and 10245 are separated by 406 nucleotides10245 and 10246 are separated by 294 nucleotides10246 and 10247 are separated by 364 nucleotides10247 and 10248 are separated by 141 nucleotides10248 and 10249 are separated by 583 nucleotides10249 and 10250 are separated by 679 nucleotides10250 and 10251 are separated by 323 nucleotides10251 and 10252 are separated by 615 nucleotides10252 and 10253 are separated by 261 nucleotides mRNA_1875: 10243 - Hypothetical Protein, at 415,484 to 416,261 10243 mRNA_1876: 10244 - Hypothetical Protein, at 416,392 to 418,180 10244 mRNA_1877: 10245 - K03363 CDC20 cell division cycle 20, cofactor of APC complex, at 418,587 to 420,557 10245 mRNA_1878: 10246 - K01875 SARS, serS seryl-tRNA synthetase, at 420,852 to 422,750 10246 mRNA_1879: 10247 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 423,115 to 424,156 10247 mRNA_1880: 10248 - KOG0254 Predicted transporter (major facilitator superfamily), at 424,298 to 426,105 10248 mRNA_1881: 10249 - K11770 SFH1 chromatin structure-remodeling complex subunit SFH1, at 426,689 to 428,081 10249 mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428,761 to 429,844 10250 mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430,168 to 431,962 10251 mRNA_1884: 10252 - Hypothetical Protein, at 432,578 to 433,282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433,544 to 436,141 10253
Locus Name Description Strand Phenotype
mRNA_1875 10243 Hypothetical Protein + no data
mRNA_1876 10244 Hypothetical Protein - cofit
mRNA_1877 10245 K03363 CDC20 cell division cycle 20, cofactor of APC complex + no data
mRNA_1878 10246 K01875 SARS, serS seryl-tRNA synthetase - no data
mRNA_1879 10247 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 + cofit
mRNA_1880 10248 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_1881 10249 K11770 SFH1 chromatin structure-remodeling complex subunit SFH1 - no data
mRNA_1882 10250 HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174 - no data
mRNA_1883 10251 KOG2665 Predicted FAD-dependent oxidoreductase - cofit
mRNA_1884 10252 Hypothetical Protein + cofit
mRNA_1885 10253 KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) - insig.

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