Gene info for mRNA_1906 in Rhodosporidium toruloides IFO0880

Name: 10274
Annotation: KOG0627 Heat shock transcription factor
Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 483,012 to 484,134
See nucleotide sequence around mRNA_1906 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10269 and 10270 are separated by 120 nucleotides10270 and 10271 are separated by 1764 nucleotides10271 and 10272 are separated by 745 nucleotides10272 and 10273 are separated by 205 nucleotides10273 and 10274 are separated by 1346 nucleotides10274 and 10275 are separated by 3747 nucleotides10275 and 10276 are separated by 1345 nucleotides10276 and 10277 are separated by 581 nucleotides10277 and 10278 are separated by 180 nucleotides10278 and 10279 are separated by 167 nucleotides mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468,442 to 470,059 10269 mRNA_1902: 10270 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 470,180 to 472,538 10270 mRNA_1903: 10271 - HMMPfam-Sfi1 spindle body protein-PF08457, at 474,303 to 478,311 10271 mRNA_1904: 10272 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 479,057 to 480,594 10272 mRNA_1905: 10273 - Hypothetical Protein, at 480,800 to 481,665 10273 mRNA_1906: 10274 - KOG0627 Heat shock transcription factor, at 483,012 to 484,134 10274 mRNA_1907: 10275 - Hypothetical Protein, at 487,882 to 489,189 10275 mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490,535 to 492,598 10276 mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493,180 to 495,383 10277 mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495,564 to 497,825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497,993 to 499,871 10279
Locus Name Description Strand Phenotype
mRNA_1901 10269 HMMPfam-Spo7-like protein-PF03907 + cofit
mRNA_1902 10270 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif - insig.
mRNA_1903 10271 HMMPfam-Sfi1 spindle body protein-PF08457 + no data
mRNA_1904 10272 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 + insig.
mRNA_1905 10273 Hypothetical Protein - cofit
mRNA_1906 10274 KOG0627 Heat shock transcription factor + strong
mRNA_1907 10275 Hypothetical Protein + no data
mRNA_1908 10276 K01426 E3.5.1.4, amiE amidase - cofit
mRNA_1909 10277 K01426 E3.5.1.4, amiE amidase - cofit
mRNA_1910 10278 HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355 - cofit
mRNA_1911 10279 K14967 BRE2, CPS60 COMPASS component BRE2 + strong

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