Gene info for mRNA_1947 in Rhodosporidium toruloides IFO0880

Name: 10315
Annotation: K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 577,345 to 578,684
See nucleotide sequence around mRNA_1947 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10310 and 10311 are separated by 240 nucleotides10311 and 10312 are separated by 390 nucleotides10312 and 10313 are separated by 583 nucleotides10313 and 10314 overlap by 25 nucleotides10314 and 10315 are separated by 264 nucleotides10315 and 10316 are separated by 1724 nucleotides10316 and 10317 are separated by 491 nucleotides10317 and 10318 are separated by 1235 nucleotides10318 and 10319 are separated by 506 nucleotides10319 and 10320 are separated by 377 nucleotides mRNA_1942: 10310 - HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024, at 567,440 to 570,897 10310 mRNA_1943: 10311 - Hypothetical Protein, at 571,138 to 572,203 10311 mRNA_1944: 10312 - BLAST Respiratory supercomplex factor 2, mitochondrial [Cla..., at 572,594 to 573,767 10312 mRNA_1945: 10313 - Hypothetical Protein, at 574,351 to 575,148 10313 mRNA_1946: 10314 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 575,124 to 577,080 10314 mRNA_1947: 10315 - K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase, at 577,345 to 578,684 10315 mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580,409 to 582,858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583,350 to 585,589 10317 mRNA_1950: 10318 - K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9, at 586,825 to 587,644 10318 mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588,151 to 591,426 10319 mRNA_1952: 10320 - K14564 NOP56 nucleolar protein 56, at 591,804 to 593,975 10320
Locus Name Description Strand Phenotype
mRNA_1942 10310 HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024 + cofit
mRNA_1943 10311 Hypothetical Protein - cofit
mRNA_1944 10312 BLAST Respiratory supercomplex factor 2, mitochondrial [Cla... - cofit
mRNA_1945 10313 Hypothetical Protein + strong
mRNA_1946 10314 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif + strong
mRNA_1947 10315 K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase - cofit
mRNA_1948 10316 K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter + insig.
mRNA_1949 10317 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_1950 10318 K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 + no data
mRNA_1951 10319 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_1952 10320 K14564 NOP56 nucleolar protein 56 - no data

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