Gene info for mRNA_1951 in Rhodosporidium toruloides IFO0880

Name: 10319
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 588,151 to 591,426
See nucleotide sequence around mRNA_1951 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10314 and 10315 are separated by 264 nucleotides10315 and 10316 are separated by 1724 nucleotides10316 and 10317 are separated by 491 nucleotides10317 and 10318 are separated by 1235 nucleotides10318 and 10319 are separated by 506 nucleotides10319 and 10320 are separated by 377 nucleotides10320 and 10321 are separated by 507 nucleotides10321 and 10322 are separated by 115 nucleotides10322 and 10323 are separated by 998 nucleotides10323 and 10324 are separated by 1153 nucleotides mRNA_1946: 10314 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 575,124 to 577,080 10314 mRNA_1947: 10315 - K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase, at 577,345 to 578,684 10315 mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580,409 to 582,858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583,350 to 585,589 10317 mRNA_1950: 10318 - K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9, at 586,825 to 587,644 10318 mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588,151 to 591,426 10319 mRNA_1952: 10320 - K14564 NOP56 nucleolar protein 56, at 591,804 to 593,975 10320 mRNA_1953: 10321 - K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein, at 594,483 to 601,309 10321 mRNA_1954: 10322 - Hypothetical Protein, at 601,425 to 602,462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603,461 to 605,817 10323 mRNA_1956: 10324 - BLAST 40S ribosomal protein S1 [Exophiala sideris], at 606,971 to 607,614 10324
Locus Name Description Strand Phenotype
mRNA_1946 10314 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif + strong
mRNA_1947 10315 K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase - cofit
mRNA_1948 10316 K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter + insig.
mRNA_1949 10317 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_1950 10318 K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 + no data
mRNA_1951 10319 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_1952 10320 K14564 NOP56 nucleolar protein 56 - no data
mRNA_1953 10321 K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein + no data
mRNA_1954 10322 Hypothetical Protein - cofit
mRNA_1955 10323 KOG0379 Kelch repeat-containing proteins - cofit
mRNA_1956 10324 BLAST 40S ribosomal protein S1 [Exophiala sideris] - cofit

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