Gene info for mRNA_1956 in Rhodosporidium toruloides IFO0880

Name: 10324
Annotation: BLAST 40S ribosomal protein S1 [Exophiala sideris]
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 606,971 to 607,614
See nucleotide sequence around mRNA_1956 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10319 and 10320 are separated by 377 nucleotides10320 and 10321 are separated by 507 nucleotides10321 and 10322 are separated by 115 nucleotides10322 and 10323 are separated by 998 nucleotides10323 and 10324 are separated by 1153 nucleotides10324 and 10325 are separated by 366 nucleotides10325 and 10326 are separated by 722 nucleotides10326 and 10327 are separated by 675 nucleotides10327 and 10328 are separated by 219 nucleotides10328 and 10329 are separated by 432 nucleotides mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588,151 to 591,426 10319 mRNA_1952: 10320 - K14564 NOP56 nucleolar protein 56, at 591,804 to 593,975 10320 mRNA_1953: 10321 - K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein, at 594,483 to 601,309 10321 mRNA_1954: 10322 - Hypothetical Protein, at 601,425 to 602,462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603,461 to 605,817 10323 mRNA_1956: 10324 - BLAST 40S ribosomal protein S1 [Exophiala sideris], at 606,971 to 607,614 10324 mRNA_1957: 10325 - K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae, at 607,981 to 609,583 10325 mRNA_1958: 10326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 610,306 to 612,524 10326 mRNA_1959: 10327 - Hypothetical Protein, at 613,200 to 613,373 10327 mRNA_1960: 10328 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 613,593 to 615,935 10328 mRNA_1961: 10329 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140, at 616,368 to 617,254 10329
Locus Name Description Strand Phenotype
mRNA_1951 10319 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_1952 10320 K14564 NOP56 nucleolar protein 56 - no data
mRNA_1953 10321 K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein + no data
mRNA_1954 10322 Hypothetical Protein - cofit
mRNA_1955 10323 KOG0379 Kelch repeat-containing proteins - cofit
mRNA_1956 10324 BLAST 40S ribosomal protein S1 [Exophiala sideris] - cofit
mRNA_1957 10325 K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae + no data
mRNA_1958 10326 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) - cofit
mRNA_1959 10327 Hypothetical Protein - no data
mRNA_1960 10328 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) - insig.
mRNA_1961 10329 HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140 + strong

Or browse nearby genes

Or see the comparative fitness browser