Gene info for mRNA_1990 in Rhodosporidium toruloides IFO0880

Name: 10358
Annotation: HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756
Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 684,324 to 686,633
See nucleotide sequence around mRNA_1990 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10353 and 10354 are separated by 1107 nucleotides10354 and 10355 are separated by 690 nucleotides10355 and 10356 are separated by 59 nucleotides10356 and 10357 are separated by 1630 nucleotides10357 and 10358 are separated by 116 nucleotides10358 and 10359 are separated by 924 nucleotides10359 and 10360 are separated by 385 nucleotides10360 and 10361 are separated by 954 nucleotides10361 and 10362 are separated by 523 nucleotides10362 and 10363 are separated by 930 nucleotides mRNA_1985: 10353 - Hypothetical Protein, at 672,578 to 672,870 10353 mRNA_1986: 10354 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 673,978 to 676,416 10354 mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677,107 to 679,198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679,258 to 681,059 10356 mRNA_1989: 10357 - KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats), at 682,690 to 684,207 10357 mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684,324 to 686,633 10358 mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687,558 to 690,393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690,779 to 693,096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694,051 to 694,539 10361 mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695,063 to 698,759 10362 mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699,690 to 700,377 10363
Locus Name Description Strand Phenotype
mRNA_1985 10353 Hypothetical Protein - no data
mRNA_1986 10354 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif + no data
mRNA_1987 10355 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + cofit
mRNA_1988 10356 KOG1674 Cyclin - insig.
mRNA_1989 10357 KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats) - no data
mRNA_1990 10358 HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756 + no data
mRNA_1991 10359 K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family + cofit
mRNA_1992 10360 BLAST protein of unknown function [Taphrina deformans PYCC ... - cofit
mRNA_1993 10361 Hypothetical Protein + cofit
mRNA_1994 10362 K03235 EF3, TEF3 elongation factor 3 + no data
mRNA_1995 10363 KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b + cofit

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