Gene info for mRNA_2025 in Rhodosporidium toruloides IFO0880

Name: 10393
Annotation: SUPERFAMILY--SSF53474
Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 773,905 to 776,623
See nucleotide sequence around mRNA_2025 or for all of scaffold scaffold_12

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10388 and 10389 are separated by 398 nucleotides10389 and 10390 are separated by 271 nucleotides10390 and 10391 are separated by 203 nucleotides10391 and 10392 are separated by 173 nucleotides10392 and 10393 are separated by 390 nucleotides10393 and 10394 are separated by 314 nucleotides10394 and 10395 are separated by 307 nucleotides10395 and 10396 are separated by 958 nucleotides10396 and 10397 are separated by 1135 nucleotides10397 and 10398 are separated by 288 nucleotides mRNA_2020: 10388 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 762,718 to 765,022 10388 mRNA_2021: 10389 - BLAST deacetylase-like protein [Drechmeria coniospora], at 765,421 to 766,356 10389 mRNA_2022: 10390 - BLAST KLLA0F09339p [Kluyveromyces lactis], at 766,628 to 767,371 10390 mRNA_2023: 10391 - K04718 SPHK sphingosine kinase, at 767,575 to 770,006 10391 mRNA_2024: 10392 - K15979 SND1 staphylococcal nuclease domain-containing protein 1, at 770,180 to 773,514 10392 mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773,905 to 776,623 10393 mRNA_2026: 10394 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 776,938 to 779,956 10394 mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780,264 to 781,182 10395 mRNA_2028: 10396 - HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613, at 782,141 to 783,596 10396 mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784,732 to 786,233 10397 mRNA_2030: 10398 - KOG2260 Cell division cycle 37 protein, CDC37, at 786,522 to 787,329 10398
Locus Name Description Strand Phenotype
mRNA_2020 10388 KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins - cofit
mRNA_2021 10389 BLAST deacetylase-like protein [Drechmeria coniospora] + cofit
mRNA_2022 10390 BLAST KLLA0F09339p [Kluyveromyces lactis] + cofit
mRNA_2023 10391 K04718 SPHK sphingosine kinase - cofit
mRNA_2024 10392 K15979 SND1 staphylococcal nuclease domain-containing protein 1 + cofit
mRNA_2025 10393 SUPERFAMILY--SSF53474 + cofit
mRNA_2026 10394 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit
mRNA_2027 10395 K07208 RHEB Ras homolog enriched in brain - no data
mRNA_2028 10396 HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613 + cofit
mRNA_2029 10397 K07088 K07088 uncharacterized protein - cofit
mRNA_2030 10398 KOG2260 Cell division cycle 37 protein, CDC37 - insig.

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