Gene info for mRNA_2106 in Rhodosporidium toruloides IFO0880

Name: 10474
Annotation: K15710 SHPRH E3 ubiquitin-protein ligase SHPRH
Type 1: Protein-coding gene
Located on scaffold scaffold_13, - strand, nucleotides 86,774 to 93,150
See nucleotide sequence around mRNA_2106 or for all of scaffold scaffold_13

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10469 and 10470 are separated by 324 nucleotides10470 and 10471 are separated by 168 nucleotides10471 and 10472 are separated by 52 nucleotides10472 and 10473 are separated by 579 nucleotides10473 and 10474 are separated by 326 nucleotides10474 and 10475 are separated by 705 nucleotides10475 and 10476 are separated by 221 nucleotides10476 and 10477 are separated by 1983 nucleotides10477 and 10478 are separated by 335 nucleotides10478 and 10479 are separated by 465 nucleotides mRNA_2101: 10469 - K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7, at 73,173 to 76,460 10469 mRNA_2102: 10470 - SUPERFAMILY--SSF53067, at 76,785 to 80,345 10470 mRNA_2103: 10471 - Hypothetical Protein, at 80,514 to 81,311 10471 mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81,364 to 84,462 10472 mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85,042 to 86,447 10473 mRNA_2106: 10474 - K15710 SHPRH E3 ubiquitin-protein ligase SHPRH, at 86,774 to 93,150 10474 mRNA_2107: 10475 - K01918 panC pantoate--beta-alanine ligase, at 93,856 to 95,198 10475 mRNA_2108: 10476 - Hypothetical Protein, at 95,420 to 96,044 10476 mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98,028 to 98,739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99,075 to 100,834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101,300 to 102,530 10479
Locus Name Description Strand Phenotype
mRNA_2101 10469 K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 + cofit
mRNA_2102 10470 SUPERFAMILY--SSF53067 - cofit
mRNA_2103 10471 Hypothetical Protein + insig.
mRNA_2104 10472 KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily - cofit
mRNA_2105 10473 K17991 PXG peroxygenase - cofit
mRNA_2106 10474 K15710 SHPRH E3 ubiquitin-protein ligase SHPRH - cofit
mRNA_2107 10475 K01918 panC pantoate--beta-alanine ligase + cofit
mRNA_2108 10476 Hypothetical Protein - cofit
mRNA_2109 10477 SUPERFAMILY--SSF56112 + cofit
mRNA_2110 10478 K10277 KDM8, JMJD5 lysine-specific demethylase 8 + cofit
mRNA_2111 10479 K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1 + cofit

Or browse nearby genes

Or see the comparative fitness browser