Gene info for mRNA_2140 in Rhodosporidium toruloides IFO0880

Name: 10508
Annotation: HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383
Type 1: Protein-coding gene
Located on scaffold scaffold_13, - strand, nucleotides 162,925 to 174,925
See nucleotide sequence around mRNA_2140 or for all of scaffold scaffold_13

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10503 and 10504 are separated by 287 nucleotides10504 and 10505 are separated by 656 nucleotides10505 and 10506 are separated by 127 nucleotides10506 and 10507 are separated by 275 nucleotides10507 and 10508 are separated by 441 nucleotides10508 and 10509 are separated by 931 nucleotides10509 and 10510 are separated by 1519 nucleotides10510 and 10511 are separated by 347 nucleotides10511 and 10512 are separated by 289 nucleotides10512 and 10513 are separated by 476 nucleotides mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150,841 to 152,742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153,030 to 154,707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707 10505 mRNA_2138: 10506 - HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281, at 157,835 to 161,101 10506 mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483 10507 mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925 10508 mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524 10509 mRNA_2142: 10510 - Hypothetical Protein, at 179,044 to 180,564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182,114 to 183,256 10512 mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183,733 to 185,513 10513
Locus Name Description Strand Phenotype
mRNA_2135 10503 KOG2922 Uncharacterized conserved protein + cofit
mRNA_2136 10504 K01613 psd, PISD phosphatidylserine decarboxylase + cofit
mRNA_2137 10505 Hypothetical Protein + cofit
mRNA_2138 10506 HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281 - cofit
mRNA_2139 10507 K09377 CSRP cysteine and glycine-rich protein + cofit
mRNA_2140 10508 HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383 - cofit
mRNA_2141 10509 SUPERFAMILY--SSF52047 + cofit
mRNA_2142 10510 Hypothetical Protein + insig.
mRNA_2143 10511 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 + cofit
mRNA_2144 10512 Hypothetical Protein - insig.
mRNA_2145 10513 HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321 - insig.

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