Gene info for mRNA_2185 in Rhodosporidium toruloides IFO0880

Name: 10553
Annotation: HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879
Type 1: Protein-coding gene
Located on scaffold scaffold_13, - strand, nucleotides 288,686 to 288,844
See nucleotide sequence around mRNA_2185 or for all of scaffold scaffold_13

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10548 and 10549 are separated by 2058 nucleotides10549 and 10550 are separated by 1348 nucleotides10550 and 10551 are separated by 357 nucleotides10551 and 10552 are separated by 216 nucleotides10552 and 10553 are separated by 768 nucleotides10553 and 10554 are separated by 1069 nucleotides10554 and 10555 are separated by 371 nucleotides10555 and 10556 are separated by 941 nucleotides10556 and 10557 are separated by 1260 nucleotides10557 and 10558 are separated by 1468 nucleotides mRNA_2180: 10548 - KOG0166 Karyopherin (importin) alpha, at 273,943 to 276,215 10548 mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278,274 to 281,386 10549 mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282,735 to 284,065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284,423 to 286,019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286,236 to 287,917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288,686 to 288,844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289,914 to 291,585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291,957 to 293,217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294,159 to 294,788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296,049 to 299,793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301,262 to 303,174 10558
Locus Name Description Strand Phenotype
mRNA_2180 10548 KOG0166 Karyopherin (importin) alpha - cofit
mRNA_2181 10549 K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2 + cofit
mRNA_2182 10550 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 + cofit
mRNA_2183 10551 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase - cofit
mRNA_2184 10552 Hypothetical Protein + cofit
mRNA_2185 10553 HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879 - cofit
mRNA_2186 10554 K06316 RFT1 oligosaccharide translocation protein RFT1 - no data
mRNA_2187 10555 K09602 OTUB1 ubiquitin thioesterase protein OTUB1 + cofit
mRNA_2188 10556 Hypothetical Protein + no data
mRNA_2189 10557 K11236 CDC24 cell division control protein 24 + strong
mRNA_2190 10558 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase + cofit

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