Gene info for mRNA_2188 in Rhodosporidium toruloides IFO0880

Name: 10556
Annotation: Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_13, + strand, nucleotides 294,159 to 294,788
See nucleotide sequence around mRNA_2188 or for all of scaffold scaffold_13

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10551 and 10552 are separated by 216 nucleotides10552 and 10553 are separated by 768 nucleotides10553 and 10554 are separated by 1069 nucleotides10554 and 10555 are separated by 371 nucleotides10555 and 10556 are separated by 941 nucleotides10556 and 10557 are separated by 1260 nucleotides10557 and 10558 are separated by 1468 nucleotides10558 and 10559 are separated by 841 nucleotides10559 and 10560 are separated by 220 nucleotides10560 and 10561 are separated by 148 nucleotides mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284,423 to 286,019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286,236 to 287,917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288,686 to 288,844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289,914 to 291,585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291,957 to 293,217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294,159 to 294,788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296,049 to 299,793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301,262 to 303,174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304,016 to 306,697 10559 mRNA_2192: 10560 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 306,918 to 310,071 10560 mRNA_2193: 10561 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 310,220 to 312,834 10561
Locus Name Description Strand Phenotype
mRNA_2183 10551 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase - cofit
mRNA_2184 10552 Hypothetical Protein + cofit
mRNA_2185 10553 HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879 - cofit
mRNA_2186 10554 K06316 RFT1 oligosaccharide translocation protein RFT1 - no data
mRNA_2187 10555 K09602 OTUB1 ubiquitin thioesterase protein OTUB1 + cofit
mRNA_2188 10556 Hypothetical Protein + no data
mRNA_2189 10557 K11236 CDC24 cell division control protein 24 + strong
mRNA_2190 10558 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase + cofit
mRNA_2191 10559 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 + cofit
mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_2193 10561 HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474 - cofit

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