Gene info for mRNA_2227 in Rhodosporidium toruloides IFO0880

Name: 10595
Annotation: K12392 AP1B1 AP-1 complex subunit beta-1
Type 1: Protein-coding gene
Located on scaffold scaffold_13, - strand, nucleotides 409,342 to 412,255
See nucleotide sequence around mRNA_2227 or for all of scaffold scaffold_13

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10590 and 10591 are separated by 122 nucleotides10591 and 10592 are separated by 291 nucleotides10592 and 10593 are separated by 606 nucleotides10593 and 10594 are separated by 586 nucleotides10594 and 10595 are separated by 123 nucleotides10595 and 10596 are separated by 131 nucleotides10596 and 10597 are separated by 2624 nucleotides10597 and 10598 are separated by 679 nucleotides10598 and 10599 are separated by 345 nucleotides10599 and 10600 are separated by 1811 nucleotides mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394,063 to 398,428 10590 mRNA_2223: 10591 - Hypothetical Protein, at 398,551 to 400,277 10591 mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400,569 to 403,367 10592 mRNA_2225: 10593 - Hypothetical Protein, at 403,974 to 404,899 10593 mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405,486 to 409,218 10594 mRNA_2227: 10595 - K12392 AP1B1 AP-1 complex subunit beta-1, at 409,342 to 412,255 10595 mRNA_2228: 10596 - K14191 DIM1 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase, at 412,387 to 413,949 10596 mRNA_2229: 10597 - HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067, at 416,574 to 419,223 10597 mRNA_2230: 10598 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 419,903 to 421,996 10598 mRNA_2231: 10599 - Hypothetical Protein, at 422,342 to 422,815 10599 mRNA_2232: 10600 - Hypothetical Protein, at 424,627 to 425,038 10600
Locus Name Description Strand Phenotype
mRNA_2222 10590 K14801 TSR4 pre-rRNA-processing protein TSR4 + no data
mRNA_2223 10591 Hypothetical Protein - cofit
mRNA_2224 10592 KOG2653 6-phosphogluconate dehydrogenase - cofit
mRNA_2225 10593 Hypothetical Protein + cofit
mRNA_2226 10594 SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717 + cofit
mRNA_2227 10595 K12392 AP1B1 AP-1 complex subunit beta-1 - cofit
mRNA_2228 10596 K14191 DIM1 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase + no data
mRNA_2229 10597 HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067 + cofit
mRNA_2230 10598 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 + cofit
mRNA_2231 10599 Hypothetical Protein - no data
mRNA_2232 10600 Hypothetical Protein - cofit

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