Gene info for mRNA_2450 in Rhodosporidium toruloides IFO0880

Name: 10818
Annotation: KOG3037 Cell membrane glycoprotein
Type 1: Protein-coding gene
Located on scaffold scaffold_14, - strand, nucleotides 161,540 to 163,035
See nucleotide sequence around mRNA_2450 or for all of scaffold scaffold_14

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10813 and 10814 are separated by 367 nucleotides10814 and 10815 are separated by 266 nucleotides10815 and 10816 are separated by 872 nucleotides10816 and 10817 are separated by 376 nucleotides10817 and 10818 are separated by 94 nucleotides10818 and 10819 are separated by 352 nucleotides10819 and 10820 are separated by 259 nucleotides10820 and 10821 are separated by 468 nucleotides10821 and 10822 are separated by 985 nucleotides10822 and 10823 are separated by 138 nucleotides mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151,366 to 153,133 10813 mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153,501 to 155,365 10814 mRNA_2447: 10815 - Hypothetical Protein, at 155,632 to 156,162 10815 mRNA_2448: 10816 - Hypothetical Protein, at 157,035 to 159,573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159,950 to 161,445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161,540 to 163,035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163,388 to 164,949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165,209 to 166,286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166,755 to 168,701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169,687 to 172,594 10822 mRNA_2455: 10823 - K16912 LAS1 ribosomal biogenesis protein LAS1, at 172,733 to 174,671 10823
Locus Name Description Strand Phenotype
mRNA_2445 10813 HMMPfam-Protein of unknown function (DUF3533)-PF12051 - cofit
mRNA_2446 10814 K11396 YNG2, EAF4 chromatin modification-related protein YNG2 - no data
mRNA_2447 10815 Hypothetical Protein + insig.
mRNA_2448 10816 Hypothetical Protein + insig.
mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 + cofit
mRNA_2450 10818 KOG3037 Cell membrane glycoprotein - cofit
mRNA_2451 10819 Hypothetical Protein + cofit
mRNA_2452 10820 HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615 + cofit
mRNA_2453 10821 HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 - cofit
mRNA_2454 10822 K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2 - no data
mRNA_2455 10823 K16912 LAS1 ribosomal biogenesis protein LAS1 + no data

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