Gene info for mRNA_2620 in Rhodosporidium toruloides IFO0880

Name: 10988
Annotation: ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296
Type 1: Protein-coding gene
Located on scaffold scaffold_14, + strand, nucleotides 609,303 to 611,052
See nucleotide sequence around mRNA_2620 or for all of scaffold scaffold_14

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 10983 and 10984 are separated by 448 nucleotides10984 and 10985 are separated by 486 nucleotides10985 and 10986 are separated by 101 nucleotides10986 and 10987 are separated by 482 nucleotides10987 and 10988 are separated by 543 nucleotides10988 and 10989 are separated by 338 nucleotides10989 and 10990 are separated by 345 nucleotides10990 and 10991 are separated by 310 nucleotides10991 and 10992 are separated by 93 nucleotides10992 and 10993 are separated by 361 nucleotides mRNA_2615: 10983 - K14775 UTP30, RSL1D1 ribosome biogenesis protein UTP30, at 602,494 to 603,879 10983 mRNA_2616: 10984 - KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins, at 604,328 to 604,979 10984 mRNA_2617: 10985 - HMMPfam-Carbonic anhydrase-PF00484,SMART-Carbonic anhydrase-SM00947,SUPERFAMILY--SSF53056, at 605,466 to 606,411 10985 mRNA_2618: 10986 - Hypothetical Protein, at 606,513 to 607,761 10986 mRNA_2619: 10987 - Hypothetical Protein, at 608,244 to 608,759 10987 mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609,303 to 611,052 10988 mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611,391 to 613,373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613,719 to 614,794 10990 mRNA_2623: 10991 - K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase, at 615,105 to 616,887 10991 mRNA_2624: 10992 - SUPERFAMILY--SSF52058, at 616,981 to 618,073 10992 mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618,435 to 621,494 10993
Locus Name Description Strand Phenotype
mRNA_2615 10983 K14775 UTP30, RSL1D1 ribosome biogenesis protein UTP30 - no data
mRNA_2616 10984 KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins - strong
mRNA_2617 10985 HMMPfam-Carbonic anhydrase-PF00484,SMART-Carbonic anhydrase-SM00947,SUPERFAMILY--SSF53056 - cofit
mRNA_2618 10986 Hypothetical Protein - no data
mRNA_2619 10987 Hypothetical Protein + cofit
mRNA_2620 10988 ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296 + cofit
mRNA_2621 10989 K01711 gmd, GMDS GDPmannose 4,6-dehydratase + cofit
mRNA_2622 10990 BLAST expressed protein [Schizophyllum commune H4-8] - insig.
mRNA_2623 10991 K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase + cofit
mRNA_2624 10992 SUPERFAMILY--SSF52058 - cofit
mRNA_2625 10993 K20784 XEG113 arabinosyltransferase + cofit

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