Gene info for mRNA_2638 in Rhodosporidium toruloides IFO0880

Name: 11006
Annotation: SMART-heat shock factor-SM00415
Type 1: Protein-coding gene
Located on scaffold scaffold_14, - strand, nucleotides 650,946 to 653,673
See nucleotide sequence around mRNA_2638 or for all of scaffold scaffold_14

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11001 and 11002 are separated by 313 nucleotides11002 and 11003 are separated by 115 nucleotides11003 and 11004 are separated by 251 nucleotides11004 and 11005 are separated by 179 nucleotides11005 and 11006 are separated by 276 nucleotides11006 and 11007 are separated by 839 nucleotides11007 and 11008 are separated by 920 nucleotides11008 and 11009 are separated by 282 nucleotides11009 and 11010 are separated by 523 nucleotides11010 and 11011 are separated by 266 nucleotides mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638,578 to 641,420 11001 mRNA_2634: 11002 - KOG2234 Predicted UDP-galactose transporter, at 641,734 to 644,523 11002 mRNA_2635: 11003 - KOG2615 Permease of the major facilitator superfamily, at 644,639 to 646,229 11003 mRNA_2636: 11004 - K01303 APEH acylaminoacyl-peptidase, at 646,481 to 649,252 11004 mRNA_2637: 11005 - HMMPfam-Sulphur transport-PF04143,HMMPfam-Domain of unknown function (DUF4341)-PF14241, at 649,432 to 650,669 11005 mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650,946 to 653,673 11006 mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654,513 to 656,042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656,963 to 657,920 11008 mRNA_2641: 11009 - Hypothetical Protein, at 658,203 to 659,346 11009 mRNA_2642: 11010 - K17428 MRPL47, NCM1 large subunit ribosomal protein L47, at 659,870 to 660,906 11010 mRNA_2643: 11011 - K01254 LTA4H leukotriene-A4 hydrolase, at 661,173 to 664,262 11011
Locus Name Description Strand Phenotype
mRNA_2633 11001 HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784 - insig.
mRNA_2634 11002 KOG2234 Predicted UDP-galactose transporter + cofit
mRNA_2635 11003 KOG2615 Permease of the major facilitator superfamily - cofit
mRNA_2636 11004 K01303 APEH acylaminoacyl-peptidase - cofit
mRNA_2637 11005 HMMPfam-Sulphur transport-PF04143,HMMPfam-Domain of unknown function (DUF4341)-PF14241 + cofit
mRNA_2638 11006 SMART-heat shock factor-SM00415 - cofit
mRNA_2639 11007 HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445 + cofit
mRNA_2640 11008 Hypothetical Protein + cofit
mRNA_2641 11009 Hypothetical Protein + cofit
mRNA_2642 11010 K17428 MRPL47, NCM1 large subunit ribosomal protein L47 - no data
mRNA_2643 11011 K01254 LTA4H leukotriene-A4 hydrolase + cofit

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