Gene info for mRNA_2847 in Rhodosporidium toruloides IFO0880

Name: 11215
Annotation: ProSitePatterns-Zinc finger RING-type signature.-PS00518
Type 1: Protein-coding gene
Located on scaffold scaffold_15, - strand, nucleotides 351,577 to 353,493
See nucleotide sequence around mRNA_2847 or for all of scaffold scaffold_15

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11210 and 11211 are separated by 393 nucleotides11211 and 11212 are separated by 436 nucleotides11212 and 11213 are separated by 192 nucleotides11213 and 11214 are separated by 183 nucleotides11214 and 11215 are separated by 192 nucleotides11215 and 11216 are separated by 950 nucleotides11216 and 11217 are separated by 1380 nucleotides11217 and 11218 are separated by 300 nucleotides11218 and 11219 are separated by 401 nucleotides11219 and 11220 are separated by 270 nucleotides mRNA_2842: 11210 - Hypothetical Protein, at 341,749 to 343,529 11210 mRNA_2843: 11211 - Hypothetical Protein, at 343,923 to 345,879 11211 mRNA_2844: 11212 - SUPERFAMILY--SSF54427, at 346,316 to 346,839 11212 mRNA_2845: 11213 - K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3, at 347,032 to 349,782 11213 mRNA_2846: 11214 - KOG3100 Uncharacterized conserved protein, at 349,966 to 351,384 11214 mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351,577 to 353,493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354,444 to 356,897 11216 mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358,278 to 359,885 11217 mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360,186 to 362,999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363,401 to 364,630 11219 mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364,901 to 367,915 11220
Locus Name Description Strand Phenotype
mRNA_2842 11210 Hypothetical Protein + cofit
mRNA_2843 11211 Hypothetical Protein + cofit
mRNA_2844 11212 SUPERFAMILY--SSF54427 + cofit
mRNA_2845 11213 K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3 - no data
mRNA_2846 11214 KOG3100 Uncharacterized conserved protein + no data
mRNA_2847 11215 ProSitePatterns-Zinc finger RING-type signature.-PS00518 - cofit
mRNA_2848 11216 HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373 - insig.
mRNA_2849 11217 K01611 speD, AMD1 S-adenosylmethionine decarboxylase + no data
mRNA_2850 11218 SUPERFAMILY--SSF52047 - cofit
mRNA_2851 11219 SUPERFAMILY--SSF52047 - cofit
mRNA_2852 11220 K01164 POP1 ribonuclease P/MRP protein subunit POP1 + no data

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