Gene info for mRNA_2850 in Rhodosporidium toruloides IFO0880

Name: 11218
Annotation: SUPERFAMILY--SSF52047
Type 1: Protein-coding gene
Located on scaffold scaffold_15, - strand, nucleotides 360,186 to 362,999
See nucleotide sequence around mRNA_2850 or for all of scaffold scaffold_15

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11213 and 11214 are separated by 183 nucleotides11214 and 11215 are separated by 192 nucleotides11215 and 11216 are separated by 950 nucleotides11216 and 11217 are separated by 1380 nucleotides11217 and 11218 are separated by 300 nucleotides11218 and 11219 are separated by 401 nucleotides11219 and 11220 are separated by 270 nucleotides11220 and 11221 are separated by 356 nucleotides11221 and 11222 are separated by 640 nucleotides11222 and 11223 are separated by 598 nucleotides mRNA_2845: 11213 - K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3, at 347,032 to 349,782 11213 mRNA_2846: 11214 - KOG3100 Uncharacterized conserved protein, at 349,966 to 351,384 11214 mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351,577 to 353,493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354,444 to 356,897 11216 mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358,278 to 359,885 11217 mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360,186 to 362,999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363,401 to 364,630 11219 mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364,901 to 367,915 11220 mRNA_2853: 11221 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 368,272 to 370,458 11221 mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371,099 to 373,142 11222 mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373,741 to 377,451 11223
Locus Name Description Strand Phenotype
mRNA_2845 11213 K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3 - no data
mRNA_2846 11214 KOG3100 Uncharacterized conserved protein + no data
mRNA_2847 11215 ProSitePatterns-Zinc finger RING-type signature.-PS00518 - cofit
mRNA_2848 11216 HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373 - insig.
mRNA_2849 11217 K01611 speD, AMD1 S-adenosylmethionine decarboxylase + no data
mRNA_2850 11218 SUPERFAMILY--SSF52047 - cofit
mRNA_2851 11219 SUPERFAMILY--SSF52047 - cofit
mRNA_2852 11220 K01164 POP1 ribonuclease P/MRP protein subunit POP1 + no data
mRNA_2853 11221 BLAST transmembrane protein, putative [Rhizoctonia solani A... - cofit
mRNA_2854 11222 KOG2084 Predicted histone tail methylase containing SET domain - cofit
mRNA_2855 11223 K10747 LIG1 DNA ligase 1 + no data

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