Gene info for mRNA_2866 in Rhodosporidium toruloides IFO0880

Name: 11234
Annotation: ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689
Type 1: Protein-coding gene
Located on scaffold scaffold_15, - strand, nucleotides 397,410 to 402,844
See nucleotide sequence around mRNA_2866 or for all of scaffold scaffold_15

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11229 and 11230 are separated by 642 nucleotides11230 and 11231 are separated by 212 nucleotides11231 and 11232 are separated by 129 nucleotides11232 and 11233 are separated by 298 nucleotides11233 and 11234 are separated by 368 nucleotides11234 and 11235 are separated by 419 nucleotides11235 and 11236 are separated by 595 nucleotides11236 and 11237 are separated by 514 nucleotides11237 and 11238 are separated by 223 nucleotides11238 and 11239 are separated by 413 nucleotides mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388,346 to 389,336 11229 mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389,979 to 392,232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392,445 to 393,702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393,832 to 395,067 11232 mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395,366 to 397,041 11233 mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397,410 to 402,844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403,264 to 404,865 11235 mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405,461 to 407,348 11236 mRNA_2869: 11237 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 407,863 to 408,924 11237 mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409,148 to 410,896 11238 mRNA_2871: 11239 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 411,310 to 412,108 11239
Locus Name Description Strand Phenotype
mRNA_2861 11229 KOG4754 Predicted phosphoglycerate mutase - no data
mRNA_2862 11230 PRINTS-Proline rich extensin signature-PR01217 + cofit
mRNA_2863 11231 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - insig.
mRNA_2864 11232 KOG2699 Predicted ubiquitin regulatory protein + cofit
mRNA_2865 11233 SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717 - cofit
mRNA_2866 11234 ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 - cofit
mRNA_2867 11235 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 - cofit
mRNA_2868 11236 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 - cofit
mRNA_2869 11237 KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes + insig.
mRNA_2870 11238 SUPERFAMILY--SSF64182 - cofit
mRNA_2871 11239 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 + cofit

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