Gene info for mRNA_2872 in Rhodosporidium toruloides IFO0880

Name: 11240
Annotation: HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905
Type 1: Protein-coding gene
Located on scaffold scaffold_15, + strand, nucleotides 412,487 to 414,015
See nucleotide sequence around mRNA_2872 or for all of scaffold scaffold_15

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11235 and 11236 are separated by 595 nucleotides11236 and 11237 are separated by 514 nucleotides11237 and 11238 are separated by 223 nucleotides11238 and 11239 are separated by 413 nucleotides11239 and 11240 are separated by 378 nucleotides11240 and 11241 are separated by 195 nucleotides11241 and 11242 are separated by 261 nucleotides11242 and 11243 are separated by 398 nucleotides11243 and 11244 are separated by 300 nucleotides11244 and 11245 are separated by 227 nucleotides mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403,264 to 404,865 11235 mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405,461 to 407,348 11236 mRNA_2869: 11237 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 407,863 to 408,924 11237 mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409,148 to 410,896 11238 mRNA_2871: 11239 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 411,310 to 412,108 11239 mRNA_2872: 11240 - HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905, at 412,487 to 414,015 11240 mRNA_2873: 11241 - HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575, at 414,211 to 417,159 11241 mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417,421 to 420,167 11242 mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420,566 to 422,079 11243 mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422,380 to 429,450 11244 mRNA_2877: 11245 - Hypothetical Protein, at 429,678 to 431,024 11245
Locus Name Description Strand Phenotype
mRNA_2867 11235 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 - cofit
mRNA_2868 11236 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 - cofit
mRNA_2869 11237 KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes + insig.
mRNA_2870 11238 SUPERFAMILY--SSF64182 - cofit
mRNA_2871 11239 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 + cofit
mRNA_2872 11240 HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905 + cofit
mRNA_2873 11241 HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575 - insig.
mRNA_2874 11242 K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase + cofit
mRNA_2875 11243 HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850 + cofit
mRNA_2876 11244 K18715 NUP159 nucleoporin NUP159 + cofit
mRNA_2877 11245 Hypothetical Protein + insig.

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