Gene info for mRNA_2874 in Rhodosporidium toruloides IFO0880

Name: 11242
Annotation: K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
Type 1: Protein-coding gene
Located on scaffold scaffold_15, + strand, nucleotides 417,421 to 420,167
See nucleotide sequence around mRNA_2874 or for all of scaffold scaffold_15

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11237 and 11238 are separated by 223 nucleotides11238 and 11239 are separated by 413 nucleotides11239 and 11240 are separated by 378 nucleotides11240 and 11241 are separated by 195 nucleotides11241 and 11242 are separated by 261 nucleotides11242 and 11243 are separated by 398 nucleotides11243 and 11244 are separated by 300 nucleotides11244 and 11245 are separated by 227 nucleotides11245 and 11246 are separated by 127 nucleotides11246 and 11247 are separated by 187 nucleotides mRNA_2869: 11237 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 407,863 to 408,924 11237 mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409,148 to 410,896 11238 mRNA_2871: 11239 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 411,310 to 412,108 11239 mRNA_2872: 11240 - HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905, at 412,487 to 414,015 11240 mRNA_2873: 11241 - HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575, at 414,211 to 417,159 11241 mRNA_2874: 11242 - K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase, at 417,421 to 420,167 11242 mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420,566 to 422,079 11243 mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422,380 to 429,450 11244 mRNA_2877: 11245 - Hypothetical Protein, at 429,678 to 431,024 11245 mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431,152 to 434,004 11246 mRNA_2879: 11247 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 434,192 to 435,080 11247
Locus Name Description Strand Phenotype
mRNA_2869 11237 KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes + insig.
mRNA_2870 11238 SUPERFAMILY--SSF64182 - cofit
mRNA_2871 11239 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 + cofit
mRNA_2872 11240 HMMPfam-Pyridine nucleotide-disulphide oxidoreductase-PF00070,PRINTS-FAD-dependent pyridine nucleotide reductase signature-PR00368,PRINTS-Pyridine nucleotide disulphide reductase class-I signature-PR00411,SUPERFAMILY--SSF51905 + cofit
mRNA_2873 11241 HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575 - insig.
mRNA_2874 11242 K00555 TRMT1, trm1 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase + cofit
mRNA_2875 11243 HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850 + cofit
mRNA_2876 11244 K18715 NUP159 nucleoporin NUP159 + cofit
mRNA_2877 11245 Hypothetical Protein + insig.
mRNA_2878 11246 BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70... - cofit
mRNA_2879 11247 HMMPfam-Protein of unknown function (DUF3237)-PF11578 + cofit

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