Gene info for mRNA_3072 in Rhodosporidium toruloides IFO0880

Name: 11440
Annotation: KOG1203 Predicted dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 248,202 to 249,247
See nucleotide sequence around mRNA_3072 or for all of scaffold scaffold_16

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11435 and 11436 are separated by 303 nucleotides11436 and 11437 are separated by 215 nucleotides11437 and 11438 are separated by 234 nucleotides11438 and 11439 are separated by 1703 nucleotides11439 and 11440 are separated by 976 nucleotides11440 and 11441 are separated by 153 nucleotides11441 and 11442 are separated by 45 nucleotides11442 and 11443 are separated by 218 nucleotides11443 and 11444 are separated by 1326 nucleotides11444 and 11445 are separated by 29 nucleotides mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235,279 to 236,676 11435 mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236,980 to 239,400 11436 mRNA_3069: 11437 - KOG2505 Ankyrin repeat protein, at 239,616 to 241,978 11437 mRNA_3070: 11438 - Hypothetical Protein, at 242,213 to 243,874 11438 mRNA_3071: 11439 - Hypothetical Protein, at 245,578 to 247,225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248,202 to 249,247 11440 mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249,401 to 250,160 11441 mRNA_3074: 11442 - KOG4650 Predicted steroid reductase, at 250,206 to 251,968 11442 mRNA_3075: 11443 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 252,187 to 260,484 11443 mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261,811 to 264,179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264,209 to 265,729 11445
Locus Name Description Strand Phenotype
mRNA_3067 11435 HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197 + cofit
mRNA_3068 11436 K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B - cofit
mRNA_3069 11437 KOG2505 Ankyrin repeat protein + cofit
mRNA_3070 11438 Hypothetical Protein - cofit
mRNA_3071 11439 Hypothetical Protein - cofit
mRNA_3072 11440 KOG1203 Predicted dehydrogenase + cofit
mRNA_3073 11441 ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667 - cofit
mRNA_3074 11442 KOG4650 Predicted steroid reductase - cofit
mRNA_3075 11443 K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK - cofit
mRNA_3076 11444 KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats + cofit
mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V - cofit

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