Gene info for mRNA_3081 in Rhodosporidium toruloides IFO0880

Name: 11449
Annotation: KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins
Type 1: Protein-coding gene
Located on scaffold scaffold_16, - strand, nucleotides 274,779 to 278,054
See nucleotide sequence around mRNA_3081 or for all of scaffold scaffold_16

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11444 and 11445 are separated by 29 nucleotides11445 and 11446 are separated by 175 nucleotides11446 and 11447 are separated by 384 nucleotides11447 and 11448 are separated by 272 nucleotides11448 and 11449 are separated by 691 nucleotides11449 and 11450 are separated by 386 nucleotides11450 and 11451 are separated by 2093 nucleotides11451 and 11452 are separated by 123 nucleotides11452 and 11453 are separated by 1055 nucleotides11453 and 11454 are separated by 731 nucleotides mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261,811 to 264,179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264,209 to 265,729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265,905 to 270,528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270,913 to 272,289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272,562 to 274,087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274,779 to 278,054 11449 mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278,441 to 278,932 11450 mRNA_3083: 11451 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 281,026 to 282,865 11451 mRNA_3084: 11452 - Hypothetical Protein, at 282,989 to 283,312 11452 mRNA_3085: 11453 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 284,368 to 286,217 11453 mRNA_3086: 11454 - K03136 TFIIE1, GTF2E1, TFA1, tfe transcription initiation factor TFIIE subunit alpha, at 286,949 to 288,955 11454
Locus Name Description Strand Phenotype
mRNA_3076 11444 KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats + cofit
mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V - cofit
mRNA_3078 11446 K01613 psd, PISD phosphatidylserine decarboxylase - cofit
mRNA_3079 11447 HMMPfam-DNA polymerase Ligase (LigD)-PF13298 + cofit
mRNA_3080 11448 HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240 - insig.
mRNA_3081 11449 KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins - cofit
mRNA_3082 11450 K09510 DNAJB4 DnaJ homolog subfamily B member 4 - cofit
mRNA_3083 11451 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959 - cofit
mRNA_3084 11452 Hypothetical Protein - cofit
mRNA_3085 11453 K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit + cofit
mRNA_3086 11454 K03136 TFIIE1, GTF2E1, TFA1, tfe transcription initiation factor TFIIE subunit alpha - insig.

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