Gene info for mRNA_3111 in Rhodosporidium toruloides IFO0880

Name: 11479
Annotation: K09788 prpF 2-methylaconitate isomerase
Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 349,482 to 350,899
See nucleotide sequence around mRNA_3111 or for all of scaffold scaffold_16

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11474 and 11475 are separated by 396 nucleotides11475 and 11476 are separated by 111 nucleotides11476 and 11477 are separated by 214 nucleotides11477 and 11478 are separated by 153 nucleotides11478 and 11479 are separated by 276 nucleotides11479 and 11480 are separated by 179 nucleotides11480 and 11481 are separated by 383 nucleotides11481 and 11482 are separated by 449 nucleotides11482 and 11483 are separated by 282 nucleotides11483 and 11484 are separated by 88 nucleotides mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336,211 to 338,758 11474 mRNA_3107: 11475 - K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2, at 339,155 to 340,730 11475 mRNA_3108: 11476 - KOG2203 GTP-binding protein, at 340,842 to 344,399 11476 mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344,614 to 345,945 11477 mRNA_3110: 11478 - K14558 PWP2, UTP1 periodic tryptophan protein 2, at 346,099 to 349,205 11478 mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349,482 to 350,899 11479 mRNA_3112: 11480 - Hypothetical Protein, at 351,079 to 352,331 11480 mRNA_3113: 11481 - K11361 SPT20, ADA5 transcription factor SPT20, at 352,715 to 353,874 11481 mRNA_3114: 11482 - BLAST c6 zinc finger domain containing protein [Diplodia co..., at 354,324 to 355,899 11482 mRNA_3115: 11483 - Hypothetical Protein, at 356,182 to 356,910 11483 mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356,999 to 357,616 11484
Locus Name Description Strand Phenotype
mRNA_3106 11474 BLAST potential peroxisomal matrix Pex8 protein [Pseudo... + cofit
mRNA_3107 11475 K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2 + cofit
mRNA_3108 11476 KOG2203 GTP-binding protein - insig.
mRNA_3109 11477 K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2 + cofit
mRNA_3110 11478 K14558 PWP2, UTP1 periodic tryptophan protein 2 - insig.
mRNA_3111 11479 K09788 prpF 2-methylaconitate isomerase + cofit
mRNA_3112 11480 Hypothetical Protein + cofit
mRNA_3113 11481 K11361 SPT20, ADA5 transcription factor SPT20 - cofit
mRNA_3114 11482 BLAST c6 zinc finger domain containing protein [Diplodia co... - cofit
mRNA_3115 11483 Hypothetical Protein + insig.
mRNA_3116 11484 BLAST Pogo transposable element [Larimichthys crocea] + insig.

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