Gene info for mRNA_3116 in Rhodosporidium toruloides IFO0880

Name: 11484
Annotation: BLAST Pogo transposable element [Larimichthys crocea]
Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 356,999 to 357,616
See nucleotide sequence around mRNA_3116 or for all of scaffold scaffold_16

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11479 and 11480 are separated by 179 nucleotides11480 and 11481 are separated by 383 nucleotides11481 and 11482 are separated by 449 nucleotides11482 and 11483 are separated by 282 nucleotides11483 and 11484 are separated by 88 nucleotides11484 and 11485 are separated by 134 nucleotides11485 and 11486 are separated by 581 nucleotides11486 and 11487 are separated by 659 nucleotides11487 and 11488 are separated by 332 nucleotides11488 and 11489 are separated by 9 nucleotides mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349,482 to 350,899 11479 mRNA_3112: 11480 - Hypothetical Protein, at 351,079 to 352,331 11480 mRNA_3113: 11481 - K11361 SPT20, ADA5 transcription factor SPT20, at 352,715 to 353,874 11481 mRNA_3114: 11482 - BLAST c6 zinc finger domain containing protein [Diplodia co..., at 354,324 to 355,899 11482 mRNA_3115: 11483 - Hypothetical Protein, at 356,182 to 356,910 11483 mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356,999 to 357,616 11484 mRNA_3117: 11485 - KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx, at 357,751 to 358,834 11485 mRNA_3118: 11486 - K01881 PARS, proS prolyl-tRNA synthetase, at 359,416 to 362,125 11486 mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362,785 to 367,104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367,437 to 369,368 11488 mRNA_3121: 11489 - KOG1039 Predicted E3 ubiquitin ligase, at 369,378 to 369,678 11489
Locus Name Description Strand Phenotype
mRNA_3111 11479 K09788 prpF 2-methylaconitate isomerase + cofit
mRNA_3112 11480 Hypothetical Protein + cofit
mRNA_3113 11481 K11361 SPT20, ADA5 transcription factor SPT20 - cofit
mRNA_3114 11482 BLAST c6 zinc finger domain containing protein [Diplodia co... - cofit
mRNA_3115 11483 Hypothetical Protein + insig.
mRNA_3116 11484 BLAST Pogo transposable element [Larimichthys crocea] + insig.
mRNA_3117 11485 KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx - cofit
mRNA_3118 11486 K01881 PARS, proS prolyl-tRNA synthetase + cofit
mRNA_3119 11487 BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus] - insig.
mRNA_3120 11488 BLAST Protein cps3 [Rhizoctonia solani] - cofit
mRNA_3121 11489 KOG1039 Predicted E3 ubiquitin ligase - cofit

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