Gene info for mRNA_3180 in Rhodosporidium toruloides IFO0880

Name: 11548
Annotation: ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209
Type 1: Protein-coding gene
Located on scaffold scaffold_17, - strand, nucleotides 29,208 to 30,655
See nucleotide sequence around mRNA_3180 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11543 and 11544 are separated by 369 nucleotides11544 and 11545 are separated by 277 nucleotides11545 and 11546 are separated by 468 nucleotides11546 and 11547 are separated by 243 nucleotides11547 and 11548 are separated by 795 nucleotides11548 and 11549 are separated by 332 nucleotides11549 and 11550 are separated by 476 nucleotides11550 and 11551 are separated by 231 nucleotides11551 and 11552 are separated by 956 nucleotides11552 and 11553 are separated by 289 nucleotides mRNA_3175: 11543 - K01191 E3.2.1.24 alpha-mannosidase, at 12,407 to 17,406 11543 mRNA_3176: 11544 - K17301 COPB1, SEC26 coatomer subunit beta, at 17,776 to 21,807 11544 mRNA_3177: 11545 - KOG2164 Predicted E3 ubiquitin ligase, at 22,085 to 24,622 11545 mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25,091 to 26,696 11546 mRNA_3179: 11547 - Hypothetical Protein, at 26,940 to 28,412 11547 mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29,208 to 30,655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30,988 to 32,695 11549 mRNA_3182: 11550 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 33,172 to 34,723 11550 mRNA_3183: 11551 - HMMPfam-Cohesin loading factor-PF10345, at 34,955 to 37,755 11551 mRNA_3184: 11552 - K13220 WBP4, FBP21 WW domain-binding protein 4, at 38,712 to 39,951 11552 mRNA_3185: 11553 - KOG1577 Aldo/keto reductase family proteins, at 40,241 to 41,550 11553
Locus Name Description Strand Phenotype
mRNA_3175 11543 K01191 E3.2.1.24 alpha-mannosidase - cofit
mRNA_3176 11544 K17301 COPB1, SEC26 coatomer subunit beta + no data
mRNA_3177 11545 KOG2164 Predicted E3 ubiquitin ligase + cofit
mRNA_3178 11546 KOG4561 Uncharacterized conserved protein, contains TBC domain - cofit
mRNA_3179 11547 Hypothetical Protein + no data
mRNA_3180 11548 ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209 - cofit
mRNA_3181 11549 KOG4842 Protein involved in sister chromatid separation and/or segregation - insig.
mRNA_3182 11550 KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB + cofit
mRNA_3183 11551 HMMPfam-Cohesin loading factor-PF10345 - no data
mRNA_3184 11552 K13220 WBP4, FBP21 WW domain-binding protein 4 + no data
mRNA_3185 11553 KOG1577 Aldo/keto reductase family proteins + insig.

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