Gene info for mRNA_3201 in Rhodosporidium toruloides IFO0880

Name: 11569
Annotation: K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1
Type 1: Protein-coding gene
Located on scaffold scaffold_17, + strand, nucleotides 77,177 to 79,098
See nucleotide sequence around mRNA_3201 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11564 and 11565 are separated by 495 nucleotides11565 and 11566 are separated by 661 nucleotides11566 and 11567 are separated by 256 nucleotides11567 and 11568 are separated by 637 nucleotides11568 and 11569 are separated by 199 nucleotides11569 and 11570 are separated by 476 nucleotides11570 and 11571 are separated by 142 nucleotides11571 and 11572 are separated by 256 nucleotides11572 and 11573 are separated by 220 nucleotides11573 and 11574 are separated by 220 nucleotides mRNA_3196: 11564 - Hypothetical Protein, at 62,107 to 63,896 11564 mRNA_3197: 11565 - BLAST similar to An12g07160 [Aspergillus kawachii IFO 4308], at 64,392 to 66,116 11565 mRNA_3198: 11566 - K20176 SGSM3, MAP small G protein signaling modulator 3, at 66,778 to 71,121 11566 mRNA_3199: 11567 - K12881 THOC4, ALY THO complex subunit 4, at 71,378 to 73,355 11567 mRNA_3200: 11568 - KOG1515 Arylacetamide deacetylase, at 73,993 to 76,977 11568 mRNA_3201: 11569 - K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1, at 77,177 to 79,098 11569 mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79,575 to 81,413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81,556 to 81,888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82,145 to 83,066 11572 mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83,287 to 85,713 11573 mRNA_3206: 11574 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 85,934 to 91,274 11574
Locus Name Description Strand Phenotype
mRNA_3196 11564 Hypothetical Protein + insig.
mRNA_3197 11565 BLAST similar to An12g07160 [Aspergillus kawachii IFO 4308] + cofit
mRNA_3198 11566 K20176 SGSM3, MAP small G protein signaling modulator 3 + cofit
mRNA_3199 11567 K12881 THOC4, ALY THO complex subunit 4 - no data
mRNA_3200 11568 KOG1515 Arylacetamide deacetylase + cofit
mRNA_3201 11569 K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1 + cofit
mRNA_3202 11570 KOG2533 Permease of the major facilitator superfamily + cofit
mRNA_3203 11571 Hypothetical Protein - cofit
mRNA_3204 11572 SUPERFAMILY--SSF69118 + cofit
mRNA_3205 11573 K13281 uvsE, UVE1 UV DNA damage endonuclease - cofit
mRNA_3206 11574 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit

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