Gene info for mRNA_3230 in Rhodosporidium toruloides IFO0880

Name: 11598
Annotation: HMMPfam-Region of unknown function (DUF2417)-PF10329
Type 1: Protein-coding gene
Located on scaffold scaffold_17, - strand, nucleotides 155,480 to 157,759
See nucleotide sequence around mRNA_3230 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11593 and 11594 are separated by 232 nucleotides11594 and 11595 are separated by 1035 nucleotides11595 and 11596 are separated by 421 nucleotides11596 and 11597 are separated by 229 nucleotides11597 and 11598 are separated by 940 nucleotides11598 and 11599 are separated by 42 nucleotides11599 and 11600 are separated by 315 nucleotides11600 and 11601 are separated by 423 nucleotides11601 and 11602 are separated by 181 nucleotides11602 and 11603 are separated by 4037 nucleotides mRNA_3225: 11593 - KOG0951 RNA helicase BRR2, DEAD-box superfamily, at 139,733 to 140,179 11593 mRNA_3226: 11594 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 140,412 to 142,107 11594 mRNA_3227: 11595 - K12854 SNRNP200, BRR2 pre-mRNA-splicing helicase BRR2, at 143,143 to 150,132 11595 mRNA_3228: 11596 - Hypothetical Protein, at 150,554 to 152,280 11596 mRNA_3229: 11597 - K01113 phoD alkaline phosphatase D, at 152,510 to 154,539 11597 mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155,480 to 157,759 11598 mRNA_3231: 11599 - KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases, at 157,802 to 159,637 11599 mRNA_3232: 11600 - ProSiteProfiles-BRCT domain profile.-PS50172, at 159,953 to 161,045 11600 mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161,469 to 163,797 11601 mRNA_3234: 11602 - Hypothetical Protein, at 163,979 to 166,240 11602 mRNA_3235: 11603 - Hypothetical Protein, at 170,278 to 173,457 11603
Locus Name Description Strand Phenotype
mRNA_3225 11593 KOG0951 RNA helicase BRR2, DEAD-box superfamily + cofit
mRNA_3226 11594 K05535 MNN2 alpha 1,2-mannosyltransferase - cofit
mRNA_3227 11595 K12854 SNRNP200, BRR2 pre-mRNA-splicing helicase BRR2 - no data
mRNA_3228 11596 Hypothetical Protein + cofit
mRNA_3229 11597 K01113 phoD alkaline phosphatase D - cofit
mRNA_3230 11598 HMMPfam-Region of unknown function (DUF2417)-PF10329 - cofit
mRNA_3231 11599 KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases - cofit
mRNA_3232 11600 ProSiteProfiles-BRCT domain profile.-PS50172 + cofit
mRNA_3233 11601 KOG1339 Aspartyl protease + cofit
mRNA_3234 11602 Hypothetical Protein - cofit
mRNA_3235 11603 Hypothetical Protein + cofit

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