Gene info for mRNA_3279 in Rhodosporidium toruloides IFO0880

Name: 11647
Annotation: HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899
Type 1: Protein-coding gene
Located on scaffold scaffold_17, - strand, nucleotides 278,313 to 280,858
See nucleotide sequence around mRNA_3279 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11642 and 11643 are separated by 57 nucleotides11643 and 11644 are separated by 188 nucleotides11644 and 11645 are separated by 724 nucleotides11645 and 11646 are separated by 244 nucleotides11646 and 11647 are separated by 733 nucleotides11647 and 11648 are separated by 1011 nucleotides11648 and 11649 are separated by 215 nucleotides11649 and 11650 are separated by 475 nucleotides11650 and 11651 are separated by 598 nucleotides11651 and 11652 are separated by 128 nucleotides mRNA_3274: 11642 - K00108 betA, CHDH choline dehydrogenase, at 263,216 to 265,708 11642 mRNA_3275: 11643 - BLAST methyltransferase [Obba rivulosa], at 265,766 to 267,917 11643 mRNA_3276: 11644 - BLAST Nuclease PA3 [Grifola frondosa], at 268,106 to 268,881 11644 mRNA_3277: 11645 - K14835 NOP2 ribosomal RNA methyltransferase Nop2, at 269,606 to 272,171 11645 mRNA_3278: 11646 - K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase, at 272,416 to 277,579 11646 mRNA_3279: 11647 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 278,313 to 280,858 11647 mRNA_3280: 11648 - Hypothetical Protein, at 281,870 to 282,355 11648 mRNA_3281: 11649 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 282,571 to 284,691 11649 mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285,167 to 286,436 11650 mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287,035 to 291,052 11651 mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291,181 to 293,324 11652
Locus Name Description Strand Phenotype
mRNA_3274 11642 K00108 betA, CHDH choline dehydrogenase - cofit
mRNA_3275 11643 BLAST methyltransferase [Obba rivulosa] + cofit
mRNA_3276 11644 BLAST Nuclease PA3 [Grifola frondosa] - cofit
mRNA_3277 11645 K14835 NOP2 ribosomal RNA methyltransferase Nop2 + no data
mRNA_3278 11646 K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase - cofit
mRNA_3279 11647 HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899 - no data
mRNA_3280 11648 Hypothetical Protein + cofit
mRNA_3281 11649 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + insig.
mRNA_3282 11650 KOG0023 Alcohol dehydrogenase, class V - cofit
mRNA_3283 11651 K20224 IPO9, RANBP9 importin-9 + no data
mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... - cofit

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