Gene info for mRNA_3351 in Rhodosporidium toruloides IFO0880

Name: 11719
Annotation: K12196 VPS4 vacuolar protein-sorting-associated protein 4
Type 1: Protein-coding gene
Located on scaffold scaffold_17, + strand, nucleotides 461,320 to 463,748
See nucleotide sequence around mRNA_3351 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11714 and 11715 are separated by 1607 nucleotides11715 and 11716 are separated by 624 nucleotides11716 and 11717 are separated by 645 nucleotides11717 and 11718 are separated by 520 nucleotides11718 and 11719 are separated by 674 nucleotides11719 and 11720 are separated by 404 nucleotides11720 and 11721 are separated by 294 nucleotides11721 and 11722 are separated by 214 nucleotides11722 and 11723 are separated by 649 nucleotides11723 and 11724 are separated by 448 nucleotides mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440,091 to 443,147 11714 mRNA_3347: 11715 - PRINTS-Proline rich extensin signature-PR01217, at 444,755 to 446,622 11715 mRNA_3348: 11716 - K09831 ERG5, CYP61A sterol 22-desaturase, at 447,247 to 449,563 11716 mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450,209 to 452,145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452,666 to 460,645 11718 mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461,320 to 463,748 11719 mRNA_3352: 11720 - K06699 PSME4 proteasome activator subunit 4, at 464,153 to 471,579 11720 mRNA_3353: 11721 - K10352 MYH myosin heavy chain, at 471,874 to 478,185 11721 mRNA_3354: 11722 - KOG2395 Protein involved in vacuole import and degradation, at 478,400 to 482,104 11722 mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482,754 to 484,525 11723 mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484,974 to 486,354 11724
Locus Name Description Strand Phenotype
mRNA_3346 11714 K19844 BEM2 GTPase-activating protein BEM2 - cofit
mRNA_3347 11715 PRINTS-Proline rich extensin signature-PR01217 - cofit
mRNA_3348 11716 K09831 ERG5, CYP61A sterol 22-desaturase - no data
mRNA_3349 11717 K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1 - no data
mRNA_3350 11718 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily - cofit
mRNA_3351 11719 K12196 VPS4 vacuolar protein-sorting-associated protein 4 + no data
mRNA_3352 11720 K06699 PSME4 proteasome activator subunit 4 + insig.
mRNA_3353 11721 K10352 MYH myosin heavy chain - no data
mRNA_3354 11722 KOG2395 Protein involved in vacuole import and degradation + cofit
mRNA_3355 11723 K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase + cofit
mRNA_3356 11724 K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase - no data

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