Gene info for mRNA_3354 in Rhodosporidium toruloides IFO0880

Name: 11722
Annotation: KOG2395 Protein involved in vacuole import and degradation
Type 1: Protein-coding gene
Located on scaffold scaffold_17, + strand, nucleotides 478,400 to 482,104
See nucleotide sequence around mRNA_3354 or for all of scaffold scaffold_17

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11717 and 11718 are separated by 520 nucleotides11718 and 11719 are separated by 674 nucleotides11719 and 11720 are separated by 404 nucleotides11720 and 11721 are separated by 294 nucleotides11721 and 11722 are separated by 214 nucleotides11722 and 11723 are separated by 649 nucleotides11723 and 11724 are separated by 448 nucleotides11724 and 11725 are separated by 182 nucleotides11725 and 11726 are separated by 792 nucleotides11726 and 11727 are separated by 1399 nucleotides mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450,209 to 452,145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452,666 to 460,645 11718 mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461,320 to 463,748 11719 mRNA_3352: 11720 - K06699 PSME4 proteasome activator subunit 4, at 464,153 to 471,579 11720 mRNA_3353: 11721 - K10352 MYH myosin heavy chain, at 471,874 to 478,185 11721 mRNA_3354: 11722 - KOG2395 Protein involved in vacuole import and degradation, at 478,400 to 482,104 11722 mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482,754 to 484,525 11723 mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484,974 to 486,354 11724 mRNA_3357: 11725 - BLAST dna-directed rna polymerase i subunit rpa43 [Rhod..., at 486,537 to 488,799 11725 mRNA_3358: 11726 - Hypothetical Protein, at 489,592 to 490,817 11726 mRNA_3359: 11727 - Hypothetical Protein, at 492,217 to 492,797 11727
Locus Name Description Strand Phenotype
mRNA_3349 11717 K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1 - no data
mRNA_3350 11718 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily - cofit
mRNA_3351 11719 K12196 VPS4 vacuolar protein-sorting-associated protein 4 + no data
mRNA_3352 11720 K06699 PSME4 proteasome activator subunit 4 + insig.
mRNA_3353 11721 K10352 MYH myosin heavy chain - no data
mRNA_3354 11722 KOG2395 Protein involved in vacuole import and degradation + cofit
mRNA_3355 11723 K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase + cofit
mRNA_3356 11724 K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase - no data
mRNA_3357 11725 BLAST dna-directed rna polymerase i subunit rpa43 [Rhod... + cofit
mRNA_3358 11726 Hypothetical Protein - cofit
mRNA_3359 11727 Hypothetical Protein - cofit

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