Gene info for mRNA_3440 in Rhodosporidium toruloides IFO0880

Name: 11808
Annotation: SUPERFAMILY--SSF56112
Type 1: Protein-coding gene
Located on scaffold scaffold_18, - strand, nucleotides 110,002 to 112,287
See nucleotide sequence around mRNA_3440 or for all of scaffold scaffold_18

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11803 and 11804 are separated by 389 nucleotides11804 and 11805 are separated by 147 nucleotides11805 and 11806 are separated by 146 nucleotides11806 and 11807 are separated by 698 nucleotides11807 and 11808 are separated by 1578 nucleotides11808 and 11809 are separated by 209 nucleotides11809 and 11810 are separated by 123 nucleotides11810 and 11811 are separated by 1166 nucleotides11811 and 11812 are separated by 222 nucleotides11812 and 11813 are separated by 843 nucleotides mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91,986 to 94,017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94,407 to 97,285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97,433 to 99,630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99,777 to 103,344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423 11807 mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287 11808 mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112,497 to 113,807 11809 mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113,931 to 115,281 11810 mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116,448 to 118,253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118,476 to 119,519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120,363 to 121,884 11813
Locus Name Description Strand Phenotype
mRNA_3435 11803 K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1 + cofit
mRNA_3436 11804 HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817 - cofit
mRNA_3437 11805 K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3 + cofit
mRNA_3438 11806 KOG1162 Predicted small molecule transporter - cofit
mRNA_3439 11807 KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins - insig.
mRNA_3440 11808 SUPERFAMILY--SSF56112 - cofit
mRNA_3441 11809 K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase + cofit
mRNA_3442 11810 SUPERFAMILY--SSF52047 - insig.
mRNA_3443 11811 K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10 + cofit
mRNA_3444 11812 Hypothetical Protein - cofit
mRNA_3445 11813 HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041 - cofit

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