Gene info for mRNA_3459 in Rhodosporidium toruloides IFO0880

Name: 11827
Annotation: ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044
Type 1: Protein-coding gene
Located on scaffold scaffold_18, + strand, nucleotides 147,794 to 151,467
See nucleotide sequence around mRNA_3459 or for all of scaffold scaffold_18

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11822 and 11823 are separated by 93 nucleotides11823 and 11824 are separated by 242 nucleotides11824 and 11825 are separated by 269 nucleotides11825 and 11826 are separated by 117 nucleotides11826 and 11827 are separated by 158 nucleotides11827 and 11828 are separated by 156 nucleotides11828 and 11829 are separated by 390 nucleotides11829 and 11830 are separated by 517 nucleotides11830 and 11831 are separated by 749 nucleotides11831 and 11832 are separated by 378 nucleotides mRNA_3454: 11822 - SUPERFAMILY--SSF52047, at 139,645 to 140,934 11822 mRNA_3455: 11823 - K03424 tatD TatD DNase family protein, at 141,028 to 142,309 11823 mRNA_3456: 11824 - HMMPfam-Family of unknown function (DUF500)-PF04366, at 142,552 to 143,804 11824 mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144,074 to 145,634 11825 mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145,752 to 147,635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147,794 to 151,467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151,624 to 153,827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154,218 to 156,143 11829 mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156,661 to 162,747 11830 mRNA_3463: 11831 - Hypothetical Protein, at 163,497 to 164,279 11831 mRNA_3464: 11832 - K02684 PRI1 DNA primase small subunit, at 164,658 to 166,622 11832
Locus Name Description Strand Phenotype
mRNA_3454 11822 SUPERFAMILY--SSF52047 - insig.
mRNA_3455 11823 K03424 tatD TatD DNase family protein + cofit
mRNA_3456 11824 HMMPfam-Family of unknown function (DUF500)-PF04366 + cofit
mRNA_3457 11825 KOG1843 Uncharacterized conserved protein + insig.
mRNA_3458 11826 K03857 PIGA, GPI3 phosphatidylinositol glycan, class A - no data
mRNA_3459 11827 ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 + insig.
mRNA_3460 11828 HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153 + cofit
mRNA_3461 11829 KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains - insig.
mRNA_3462 11830 K17978 NUM1 nuclear migration protein NUM1 - insig.
mRNA_3463 11831 Hypothetical Protein + cofit
mRNA_3464 11832 K02684 PRI1 DNA primase small subunit + no data

Or browse nearby genes

Or see the comparative fitness browser