Gene info for mRNA_3548 in Rhodosporidium toruloides IFO0880

Name: 11916
Annotation: K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 22,720 to 24,408
See nucleotide sequence around mRNA_3548 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11911 and 11912 are separated by 1141 nucleotides11912 and 11913 are separated by 194 nucleotides11913 and 11914 are separated by 570 nucleotides11914 and 11915 are separated by 477 nucleotides11915 and 11916 are separated by 244 nucleotides11916 and 11917 are separated by 523 nucleotides11917 and 11918 are separated by 446 nucleotides11918 and 11919 are separated by 418 nucleotides11919 and 11920 are separated by 224 nucleotides11920 and 11921 are separated by 573 nucleotides mRNA_3543: 11911 - HMMPfam-MAGE family-PF01454, at 12,910 to 14,656 11911 mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15,798 to 16,734 11912 mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16,929 to 18,162 11913 mRNA_3546: 11914 - HMMPfam-Domain of unknown function (DUF3844)-PF12955, at 18,733 to 20,553 11914 mRNA_3547: 11915 - K02973 RP-S23e, RPS23 small subunit ribosomal protein S23e, at 21,031 to 22,475 11915 mRNA_3548: 11916 - K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase, at 22,720 to 24,408 11916 mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24,932 to 26,343 11917 mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797 11918 mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816 11920 mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973 11921
Locus Name Description Strand Phenotype
mRNA_3543 11911 HMMPfam-MAGE family-PF01454 + no data
mRNA_3544 11912 K03506 POLE4 DNA polymerase epsilon subunit 4 + cofit
mRNA_3545 11913 HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906 - cofit
mRNA_3546 11914 HMMPfam-Domain of unknown function (DUF3844)-PF12955 + insig.
mRNA_3547 11915 K02973 RP-S23e, RPS23 small subunit ribosomal protein S23e - no data
mRNA_3548 11916 K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase + cofit
mRNA_3549 11917 BLAST expressed protein [Cryptococcus neoformans var. neofo... + cofit
mRNA_3550 11918 Hypothetical Protein + cofit
mRNA_3551 11919 K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11 + insig.
mRNA_3552 11920 K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1 - cofit
mRNA_3553 11921 Hypothetical Protein + cofit

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