Gene info for mRNA_3562 in Rhodosporidium toruloides IFO0880

Name: 11930
Annotation: KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 59,099 to 59,542
See nucleotide sequence around mRNA_3562 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11925 and 11926 are separated by 163 nucleotides11926 and 11927 are separated by 281 nucleotides11927 and 11928 are separated by 437 nucleotides11928 and 11929 are separated by 1520 nucleotides11929 and 11930 are separated by 3825 nucleotides11930 and 11931 are separated by 2408 nucleotides11931 and 11932 are separated by 616 nucleotides11932 and 11933 are separated by 427 nucleotides11933 and 11934 are separated by 490 nucleotides11934 and 11935 are separated by 567 nucleotides mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41,446 to 43,898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44,062 to 47,314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47,596 to 49,033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49,471 to 51,932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53,453 to 55,273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59,099 to 59,542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61,951 to 62,967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63,584 to 64,390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935
Locus Name Description Strand Phenotype
mRNA_3557 11925 K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase + cofit
mRNA_3558 11926 K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10 - cofit
mRNA_3559 11927 K18622 ADD adducin + cofit
mRNA_3560 11928 K06101 ASH1L histone-lysine N-methyltransferase ASH1L - insig.
mRNA_3561 11929 K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1 + no data
mRNA_3562 11930 KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations - cofit
mRNA_3563 11931 Hypothetical Protein - cofit
mRNA_3564 11932 Hypothetical Protein + cofit
mRNA_3565 11933 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_3566 11934 HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664 - cofit
mRNA_3567 11935 KOG1760 Molecular chaperone Prefoldin, subunit 4 - no data

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