Gene info for mRNA_3569 in Rhodosporidium toruloides IFO0880

Name: 11937
Annotation: BLAST rna recognition domain-containing protein [Colletotri...
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 72,269 to 75,186
See nucleotide sequence around mRNA_3569 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11932 and 11933 are separated by 427 nucleotides11933 and 11934 are separated by 490 nucleotides11934 and 11935 are separated by 567 nucleotides11935 and 11936 are separated by 180 nucleotides11936 and 11937 are separated by 238 nucleotides11937 and 11938 are separated by 89 nucleotides11938 and 11939 are separated by 687 nucleotides11939 and 11940 are separated by 479 nucleotides11940 and 11941 overlap by 4 nucleotides11941 and 11942 are separated by 558 nucleotides mRNA_3564: 11932 - Hypothetical Protein, at 63,584 to 64,390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935 mRNA_3568: 11936 - KOG4055 Uncharacterized conserved protein, at 70,969 to 72,030 11936 mRNA_3569: 11937 - BLAST rna recognition domain-containing protein [Colletotri..., at 72,269 to 75,186 11937 mRNA_3570: 11938 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 75,276 to 76,903 11938 mRNA_3571: 11939 - K03681 RRP40, EXOSC3 exosome complex component RRP40, at 77,591 to 78,625 11939 mRNA_3572: 11940 - K11314 TADA2A, ADA2 transcriptional adapter 2-alpha, at 79,105 to 81,061 11940 mRNA_3573: 11941 - SUPERFAMILY--SSF54928, at 81,058 to 83,632 11941 mRNA_3574: 11942 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 84,191 to 85,564 11942
Locus Name Description Strand Phenotype
mRNA_3564 11932 Hypothetical Protein + cofit
mRNA_3565 11933 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_3566 11934 HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664 - cofit
mRNA_3567 11935 KOG1760 Molecular chaperone Prefoldin, subunit 4 - no data
mRNA_3568 11936 KOG4055 Uncharacterized conserved protein + no data
mRNA_3569 11937 BLAST rna recognition domain-containing protein [Colletotri... - cofit
mRNA_3570 11938 HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630 - cofit
mRNA_3571 11939 K03681 RRP40, EXOSC3 exosome complex component RRP40 - no data
mRNA_3572 11940 K11314 TADA2A, ADA2 transcriptional adapter 2-alpha + no data
mRNA_3573 11941 SUPERFAMILY--SSF54928 + insig.
mRNA_3574 11942 ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit

Or browse nearby genes

Or see the comparative fitness browser