Gene info for mRNA_3575 in Rhodosporidium toruloides IFO0880

Name: 11943
Annotation: Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 86,235 to 86,923
See nucleotide sequence around mRNA_3575 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11938 and 11939 are separated by 687 nucleotides11939 and 11940 are separated by 479 nucleotides11940 and 11941 overlap by 4 nucleotides11941 and 11942 are separated by 558 nucleotides11942 and 11943 are separated by 670 nucleotides11943 and 11944 are separated by 468 nucleotides11944 and 11945 are separated by 997 nucleotides11945 and 11946 are separated by 370 nucleotides11946 and 11947 are separated by 150 nucleotides11947 and 11948 are separated by 1147 nucleotides mRNA_3570: 11938 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 75,276 to 76,903 11938 mRNA_3571: 11939 - K03681 RRP40, EXOSC3 exosome complex component RRP40, at 77,591 to 78,625 11939 mRNA_3572: 11940 - K11314 TADA2A, ADA2 transcriptional adapter 2-alpha, at 79,105 to 81,061 11940 mRNA_3573: 11941 - SUPERFAMILY--SSF54928, at 81,058 to 83,632 11941 mRNA_3574: 11942 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 84,191 to 85,564 11942 mRNA_3575: 11943 - Hypothetical Protein, at 86,235 to 86,923 11943 mRNA_3576: 11944 - Hypothetical Protein, at 87,392 to 87,994 11944 mRNA_3577: 11945 - K04567 KARS, lysS lysyl-tRNA synthetase, class II, at 88,992 to 92,589 11945 mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947 mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948
Locus Name Description Strand Phenotype
mRNA_3570 11938 HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630 - cofit
mRNA_3571 11939 K03681 RRP40, EXOSC3 exosome complex component RRP40 - no data
mRNA_3572 11940 K11314 TADA2A, ADA2 transcriptional adapter 2-alpha + no data
mRNA_3573 11941 SUPERFAMILY--SSF54928 + insig.
mRNA_3574 11942 ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_3575 11943 Hypothetical Protein + cofit
mRNA_3576 11944 Hypothetical Protein - no data
mRNA_3577 11945 K04567 KARS, lysS lysyl-tRNA synthetase, class II + cofit
mRNA_3578 11946 HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316 + no data
mRNA_3579 11947 K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3 - no data
mRNA_3580 11948 KOG0715 Molecular chaperone (DnaJ superfamily) - cofit

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