Gene info for mRNA_3582 in Rhodosporidium toruloides IFO0880

Name: 11950
Annotation: HMMPfam-Polycystin cation channel-PF08016
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 100,447 to 103,297
See nucleotide sequence around mRNA_3582 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11945 and 11946 are separated by 370 nucleotides11946 and 11947 are separated by 150 nucleotides11947 and 11948 are separated by 1147 nucleotides11948 and 11949 are separated by 79 nucleotides11949 and 11950 are separated by 293 nucleotides11950 and 11951 are separated by 788 nucleotides11951 and 11952 are separated by 299 nucleotides11952 and 11953 are separated by 731 nucleotides11953 and 11954 are separated by 1442 nucleotides11954 and 11955 are separated by 181 nucleotides mRNA_3577: 11945 - K04567 KARS, lysS lysyl-tRNA synthetase, class II, at 88,992 to 92,589 11945 mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947 mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948 mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97,924 to 100,153 11949 mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100,447 to 103,297 11950 mRNA_3583: 11951 - Hypothetical Protein, at 104,086 to 104,307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104,607 to 106,241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106,973 to 108,703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110,146 to 111,411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111,593 to 112,967 11955
Locus Name Description Strand Phenotype
mRNA_3577 11945 K04567 KARS, lysS lysyl-tRNA synthetase, class II + cofit
mRNA_3578 11946 HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316 + no data
mRNA_3579 11947 K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3 - no data
mRNA_3580 11948 KOG0715 Molecular chaperone (DnaJ superfamily) - cofit
mRNA_3581 11949 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 + insig.
mRNA_3582 11950 HMMPfam-Polycystin cation channel-PF08016 - cofit
mRNA_3583 11951 Hypothetical Protein + no data
mRNA_3584 11952 K00122 FDH formate dehydrogenase - insig.
mRNA_3585 11953 KOG1339 Aspartyl protease - insig.
mRNA_3586 11954 HMMPfam-Membrane fusion protein Use1-PF09753 - no data
mRNA_3587 11955 K12836 U2AF1 splicing factor U2AF 35 kDa subunit + no data

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