Gene info for mRNA_3585 in Rhodosporidium toruloides IFO0880

Name: 11953
Annotation: KOG1339 Aspartyl protease
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 106,973 to 108,703
See nucleotide sequence around mRNA_3585 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11948 and 11949 are separated by 79 nucleotides11949 and 11950 are separated by 293 nucleotides11950 and 11951 are separated by 788 nucleotides11951 and 11952 are separated by 299 nucleotides11952 and 11953 are separated by 731 nucleotides11953 and 11954 are separated by 1442 nucleotides11954 and 11955 are separated by 181 nucleotides11955 and 11956 are separated by 244 nucleotides11956 and 11957 are separated by 485 nucleotides11957 and 11958 are separated by 1033 nucleotides mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948 mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97,924 to 100,153 11949 mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100,447 to 103,297 11950 mRNA_3583: 11951 - Hypothetical Protein, at 104,086 to 104,307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104,607 to 106,241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106,973 to 108,703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110,146 to 111,411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111,593 to 112,967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113,212 to 115,744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116,230 to 117,801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118,835 to 120,315 11958
Locus Name Description Strand Phenotype
mRNA_3580 11948 KOG0715 Molecular chaperone (DnaJ superfamily) - cofit
mRNA_3581 11949 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 + insig.
mRNA_3582 11950 HMMPfam-Polycystin cation channel-PF08016 - cofit
mRNA_3583 11951 Hypothetical Protein + no data
mRNA_3584 11952 K00122 FDH formate dehydrogenase - insig.
mRNA_3585 11953 KOG1339 Aspartyl protease - insig.
mRNA_3586 11954 HMMPfam-Membrane fusion protein Use1-PF09753 - no data
mRNA_3587 11955 K12836 U2AF1 splicing factor U2AF 35 kDa subunit + no data
mRNA_3588 11956 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_3589 11957 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383 - cofit
mRNA_3590 11958 K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma + no data

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