Gene info for mRNA_3589 in Rhodosporidium toruloides IFO0880

Name: 11957
Annotation: HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 116,230 to 117,801
See nucleotide sequence around mRNA_3589 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11952 and 11953 are separated by 731 nucleotides11953 and 11954 are separated by 1442 nucleotides11954 and 11955 are separated by 181 nucleotides11955 and 11956 are separated by 244 nucleotides11956 and 11957 are separated by 485 nucleotides11957 and 11958 are separated by 1033 nucleotides11958 and 11959 are separated by 272 nucleotides11959 and 11960 are separated by 406 nucleotides11960 and 11961 are separated by 144 nucleotides11961 and 11962 are separated by 185 nucleotides mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104,607 to 106,241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106,973 to 108,703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110,146 to 111,411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111,593 to 112,967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113,212 to 115,744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116,230 to 117,801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118,835 to 120,315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120,588 to 122,766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123,173 to 125,228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962
Locus Name Description Strand Phenotype
mRNA_3584 11952 K00122 FDH formate dehydrogenase - insig.
mRNA_3585 11953 KOG1339 Aspartyl protease - insig.
mRNA_3586 11954 HMMPfam-Membrane fusion protein Use1-PF09753 - no data
mRNA_3587 11955 K12836 U2AF1 splicing factor U2AF 35 kDa subunit + no data
mRNA_3588 11956 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_3589 11957 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383 - cofit
mRNA_3590 11958 K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma + no data
mRNA_3591 11959 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases - cofit
mRNA_3592 11960 KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) + no data
mRNA_3593 11961 K06978 K06978 uncharacterized protein - cofit
mRNA_3594 11962 K01555 FAH, fahA fumarylacetoacetase + cofit

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