Gene info for mRNA_3592 in Rhodosporidium toruloides IFO0880

Name: 11960
Annotation: KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50)
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 123,173 to 125,228
See nucleotide sequence around mRNA_3592 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11955 and 11956 are separated by 244 nucleotides11956 and 11957 are separated by 485 nucleotides11957 and 11958 are separated by 1033 nucleotides11958 and 11959 are separated by 272 nucleotides11959 and 11960 are separated by 406 nucleotides11960 and 11961 are separated by 144 nucleotides11961 and 11962 are separated by 185 nucleotides11962 and 11963 are separated by 398 nucleotides11963 and 11964 are separated by 118 nucleotides11964 and 11965 are separated by 179 nucleotides mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111,593 to 112,967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113,212 to 115,744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116,230 to 117,801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118,835 to 120,315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120,588 to 122,766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123,173 to 125,228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964 mRNA_3597: 11965 - K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1, at 132,867 to 134,971 11965
Locus Name Description Strand Phenotype
mRNA_3587 11955 K12836 U2AF1 splicing factor U2AF 35 kDa subunit + no data
mRNA_3588 11956 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_3589 11957 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383 - cofit
mRNA_3590 11958 K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma + no data
mRNA_3591 11959 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases - cofit
mRNA_3592 11960 KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) + no data
mRNA_3593 11961 K06978 K06978 uncharacterized protein - cofit
mRNA_3594 11962 K01555 FAH, fahA fumarylacetoacetase + cofit
mRNA_3595 11963 K09838 ZEP, ABA1 zeaxanthin epoxidase - insig.
mRNA_3596 11964 HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197 + cofit
mRNA_3597 11965 K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1 - cofit

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