Gene info for mRNA_3596 in Rhodosporidium toruloides IFO0880

Name: 11964
Annotation: HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 131,256 to 132,687
See nucleotide sequence around mRNA_3596 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11959 and 11960 are separated by 406 nucleotides11960 and 11961 are separated by 144 nucleotides11961 and 11962 are separated by 185 nucleotides11962 and 11963 are separated by 398 nucleotides11963 and 11964 are separated by 118 nucleotides11964 and 11965 are separated by 179 nucleotides11965 and 11966 are separated by 2287 nucleotides11966 and 11967 are separated by 217 nucleotides11967 and 11968 are separated by 612 nucleotides11968 and 11969 are separated by 927 nucleotides mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120,588 to 122,766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123,173 to 125,228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964 mRNA_3597: 11965 - K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1, at 132,867 to 134,971 11965 mRNA_3598: 11966 - KOG2652 RNA polymerase II transcription initiation factor TFIIA, large chain, at 137,259 to 138,295 11966 mRNA_3599: 11967 - K02134 ATPeF1D, ATP5D, ATP16 F-type H+-transporting ATPase subunit delta, at 138,513 to 139,861 11967 mRNA_3600: 11968 - HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748, at 140,474 to 142,309 11968 mRNA_3601: 11969 - K11367 CHD1 chromodomain-helicase-DNA-binding protein 1, at 143,237 to 148,837 11969
Locus Name Description Strand Phenotype
mRNA_3591 11959 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases - cofit
mRNA_3592 11960 KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) + no data
mRNA_3593 11961 K06978 K06978 uncharacterized protein - cofit
mRNA_3594 11962 K01555 FAH, fahA fumarylacetoacetase + cofit
mRNA_3595 11963 K09838 ZEP, ABA1 zeaxanthin epoxidase - insig.
mRNA_3596 11964 HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197 + cofit
mRNA_3597 11965 K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1 - cofit
mRNA_3598 11966 KOG2652 RNA polymerase II transcription initiation factor TFIIA, large chain - no data
mRNA_3599 11967 K02134 ATPeF1D, ATP5D, ATP16 F-type H+-transporting ATPase subunit delta + no data
mRNA_3600 11968 HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748 + cofit
mRNA_3601 11969 K11367 CHD1 chromodomain-helicase-DNA-binding protein 1 + cofit

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