Gene info for mRNA_3600 in Rhodosporidium toruloides IFO0880

Name: 11968
Annotation: HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 140,474 to 142,309
See nucleotide sequence around mRNA_3600 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 11963 and 11964 are separated by 118 nucleotides11964 and 11965 are separated by 179 nucleotides11965 and 11966 are separated by 2287 nucleotides11966 and 11967 are separated by 217 nucleotides11967 and 11968 are separated by 612 nucleotides11968 and 11969 are separated by 927 nucleotides11969 and 11970 are separated by 505 nucleotides11970 and 11971 are separated by 208 nucleotides11971 and 11972 are separated by 191 nucleotides11972 and 11973 are separated by 411 nucleotides mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964 mRNA_3597: 11965 - K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1, at 132,867 to 134,971 11965 mRNA_3598: 11966 - KOG2652 RNA polymerase II transcription initiation factor TFIIA, large chain, at 137,259 to 138,295 11966 mRNA_3599: 11967 - K02134 ATPeF1D, ATP5D, ATP16 F-type H+-transporting ATPase subunit delta, at 138,513 to 139,861 11967 mRNA_3600: 11968 - HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748, at 140,474 to 142,309 11968 mRNA_3601: 11969 - K11367 CHD1 chromodomain-helicase-DNA-binding protein 1, at 143,237 to 148,837 11969 mRNA_3602: 11970 - K10839 RAD23, HR23 UV excision repair protein RAD23, at 149,343 to 150,921 11970 mRNA_3603: 11971 - K13628 iscA, ISCA1 iron-sulfur cluster assembly protein, at 151,130 to 151,909 11971 mRNA_3604: 11972 - K10950 ERO1L ERO1-like protein alpha, at 152,101 to 154,380 11972 mRNA_3605: 11973 - K01872 AARS, alaS alanyl-tRNA synthetase, at 154,792 to 158,003 11973
Locus Name Description Strand Phenotype
mRNA_3595 11963 K09838 ZEP, ABA1 zeaxanthin epoxidase - insig.
mRNA_3596 11964 HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197 + cofit
mRNA_3597 11965 K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1 - cofit
mRNA_3598 11966 KOG2652 RNA polymerase II transcription initiation factor TFIIA, large chain - no data
mRNA_3599 11967 K02134 ATPeF1D, ATP5D, ATP16 F-type H+-transporting ATPase subunit delta + no data
mRNA_3600 11968 HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748 + cofit
mRNA_3601 11969 K11367 CHD1 chromodomain-helicase-DNA-binding protein 1 + cofit
mRNA_3602 11970 K10839 RAD23, HR23 UV excision repair protein RAD23 + cofit
mRNA_3603 11971 K13628 iscA, ISCA1 iron-sulfur cluster assembly protein + no data
mRNA_3604 11972 K10950 ERO1L ERO1-like protein alpha - no data
mRNA_3605 11973 K01872 AARS, alaS alanyl-tRNA synthetase + no data

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